Brassica napus (rape): 106352813
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Entry
106352813 CDS
T04128
Name
(RefSeq) protein PAT1 homolog 1-like
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
bna
Brassica napus (rape)
Pathway
bna03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106352813
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106352813
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106352813
mRNA degradation factors
5'-3' decay
Decapping complex
106352813
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
106352813
NCBI-ProteinID:
XP_013647902
LinkDB
All DBs
AA seq
785 aa
AA seq
DB search
MERSDSRDLYNFVRSSSDSNSKLFDASQYEFFGQNLDEMSLGGIDDDDVVAPVLGHSATD
DDDEYHLFNKGGEGAGLGSLSDMDDLATTFAKLNRNVTGPKPLGVIGDRGSGSFSRESSS
ATDWTHDTELTNWLDEQDQEANRWSSQPQSSAHSQPLYRTSSYPQQPPPLQHYNSEPIIV
PESTFTSFPPPGSRSQQTSPGSLHRAPSLPTGSQMNFTAPSPLSNSRFHLSGPSHGPHYG
GNLARYASCGPTLGNVVQPHWATDPGLLHGDHSGLLHSLAQQQQLPPRNDLMSQHMMALQ
QRQSYAQLAALQSQLYRSYPSPSRKVSFGGGEVREQHKHKSSHRSRKNKGISQQASDAAS
QKSESGLQFRSKYMTSEEIESILKMQHSNSHSNDPYVNDYYHQARLAKKSSGSRAITHFY
PSQLKDHHHQPKSRNNSSEQHQQQVHVDALGKITLPYIRRPRALLEVDSSSPGLNDQKGS
GKHLEQEPLVAARVTIEDALGVLIDIVDIDRTLQSTRPQDGGAQVKRKRQILLEGLATAF
QLADPFSKTGQKSGLTAKDDVVFLRIATLPKGRKMLTKYIQLLVPGTEITRAVCMAIFRH
LRFLFGGLPSDTLAAETIANLAKTVTVCVQAMDLRALSACLAAVVCSSEQPPLRPIGSSS
GDGASVVLISLLERAAEVVVVPRAVHGSSNDGLWRASFNEFFNLLTKYCRSKYETIRSQN
QGSAADVLELAIKREMPAELLRASLRHTNDDQRNYLLNFGRKPSAVSESASHARGGQINS
ESVMG
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atggagagatccgattccagggacctgtacaactttgttcgctcttcctcagattcaaat
agtaagctctttgatgcatctcagtatgagttttttgggcaaaatcttgacgaaatgtca
ttgggaggtattgacgatgacgatgtggtcgctcctgttcttggacattctgctactgat
gatgatgatgagtatcacttgtttaataaaggaggagagggtgcaggtttagggtcatta
tctgacatggatgatcttgccacgacttttgcaaagctaaatagaaatgtcacgggaccc
aaaccccttggagttattggtgacagaggatctggttccttttcaagagagagttcttct
gccaccgattggactcacgatacagagctcacaaactggttggacgagcaagatcaagag
gctaacagatggtcctcgcagccacagtcatctgctcattcacaacctttatacaggaca
tcctcttaccctcagcagccaccaccgttgcaacactacaatagtgaaccgatcattgta
ccagaatcaactttcacctcctttcccccgccaggcagcagatctcagcagacttcacct
ggaagcctccaccgcgctccttctcttcccaccggttctcagatgaatttcaccgcacct
tccccgctgtcaaactctagatttcatctttcaggaccctcacacgggcctcactatggt
ggtaatttggctagatatgcctcctgtggtcctacccttggtaacgttgtgcaacctcat
tgggccactgatcctggtcttctccacggagatcattctggcttattacatagtctggcg
caacaacaacaattgcctcctcgaaatgatcttatgtcgcaacatatgatggctctccag
cagaggcaatcgtatgctcagcttgcagcgctacagtctcagctgtacaggtcttatcca
tcaccatcacgtaaagtctcttttgggggtggtgaagttagggaacaacacaagcataag
tcttctcataggagtcgaaagaacaaaggcatatctcaacaggcatcagacgcagctagt
cagaaaagcgagagtggattgcagtttagatcaaagtacatgacttcagaggaaatagag
agtatactcaagatgcagcactctaattcacacagcaacgatccttatgtcaatgattat
taccaccaagctcgccttgccaagaagtcttctggatctagagcaatcactcacttctac
ccttctcagttgaaagaccaccaccaccaacctaagtcccgtaataatagttctgaacag
catcaacaacaagttcatgtagatgctcttgggaagatcacgcttccttacattcgcagg
ccacgtgcgttgcttgaggttgactcttcttctcctggtcttaatgatcaaaagggctca
gggaaacatttggagcaggaaccacttgtggcagctagggttacaattgaagatgctctt
ggagttcttatcgacatagttgacattgacaggactctccaatccacaaggccacaggac
ggaggtgctcaggttaagcgaaaacgccagatcctcctagaaggattagcgacagctttt
cagcttgctgatcccttcagcaaaaccgggcagaagtcagggctgactgctaaggatgat
gttgtctttctacgtatagcaactcttccaaagggtcgaaaaatgcttacaaagtacata
cagcttctagttccaggcactgagattactcgagctgtctgtatggctatattccgccac
ttgaggtttctcttcggcggcttgccttcggatactctggcagcagagacgattgctaat
cttgccaagacagtcacggtctgtgttcaagcaatggacctccgagcgctgagtgcttgc
cttgcagctgtggtttgttcttcggagcagccacctctgcgtcctattggaagctcttca
ggggatggtgcttcagttgtgttgatatctcttctcgagagagctgctgaagtagtggtg
gttcctcgagccgtccatgggagctctaatgatggactatggagagcctcgtttaatgag
ttcttcaaccttcttacgaaatactgcaggagcaagtatgagacgatccgtagccagaac
caagggagtgcagcggatgttttggagctggcgataaagagagaaatgcccgctgagctt
ttacgtgcgagcctccgtcataccaatgacgaccagaggaactatttgttaaactttggt
cgtaaaccgtcggccgttagtgagtctgcgtcgcatgcaaggggtggtcagatcaactct
gaatctgtgatgggttga
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