Brassica napus (rape): 106353060
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Entry
106353060 CDS
T04128
Name
(RefSeq) lysine--tRNA ligase, cytoplasmic
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
bna
Brassica napus (rape)
Pathway
bna00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
106353060
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bna01007
]
106353060
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bna03016
]
106353060
Enzymes [BR:
bna01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
106353060
Amino acid related enzymes [BR:
bna01007
]
Aminoacyl-tRNA synthetase
Class II (A)
106353060
Transfer RNA biogenesis [BR:
bna03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
106353060
Prokaryotic type
Other AARSs
106353060
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
106353060
NCBI-ProteinID:
XP_013648189
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Position
A3:complement(16873398..16876631)
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AA seq
618 aa
AA seq
DB search
MEGSADQTTQAMSKLSMDPAPSSTAEAGDGARSKNALKKELKMKQREEERKRKEEEKAKQ
APKASSQKSVASSADDEDMDPTQYFENRLKYLAAEKAKGENPYPHKFAVSMSIPEYIEKY
GGLNNGDHVEDAEVSLAGRIMSKRASSSKLFFYDLHGENFKVQVMADASKSGLDEAEFSK
LHANAKRGDIVGVTGFPGKTKRGELSIFPRSFILLSHCLHMMPRKADSVGAKKPENWVPG
EPRNPEAYVLKDQESRYRQRYLDLMLNVEVRQIFKTRANIISYVRRFLDNQRFLEVETPM
MNMIAGGAAARPFVTHHNDLDMKLYMRIAPELFLKQLIVGGLERVYEIGKQFRNEGIDLT
HNPEFTTCEFYMAFADYNDLMKMTEDMLSDMVKELTGGYKIKYHANGYDKEPIEIDFTPP
FRRIEMIGELEKVANLSIPKDLASEEANKYLIDACARFDVKCPPPQTTARLLDKLVGEFL
EVTCVNPTFIINHPEIMSPLAKWHRSNDVLTERFELFINKHELCNAYTELNDPVVQRQRF
ADQLKDRQSGDDEAMALDETFCSALEYGLAPTGGWGLGIDRLAMLFTDSQNIKEVILFPA
MRPQDDPASVKASLQAEN
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggaaggctcagctgatcaaaccacacaagcaatgtcaaaactatccatggatcctgct
ccctcgtccactgctgaggctggcgacggagctcggagtaaaaatgctctgaagaaggaa
ctgaagatgaagcagcgagaggaagagaggaaacgcaaggaagaggaaaaagccaaacaa
gctccaaaggcaagctcccagaagtcagtggcatcatcagcagatgatgaggatatggat
ccaacgcaatactttgagaacagattgaagtatctcgcggcggagaaggctaagggggag
aatccgtaccctcacaagtttgctgtgtcgatgtctatccctgagtacattgagaagtat
ggtggtttgaacaatggggatcatgttgaagacgctgaggtttctctagctgggaggata
atgagcaagcgagcttcctcttcgaagctattcttttatgatctacacggtgagaatttc
aaggtccaggttatggctgatgcaagtaagtcagggttggatgaagctgagttttcaaag
ctccatgcgaatgctaagcgtggtgatattgttggtgttactgggtttccaggaaaaact
aagagaggagagttgagtatttttcctcgatcgtttattcttctgtcacattgcctccac
atgatgccaagaaaggctgacagtgttggcgcaaagaaacctgaaaactgggttccaggt
gaaccgagaaatcctgaagcatatgttctgaaagatcaggaatctcgatatcgccagcgt
taccttgatctaatgttgaacgtggaggttcgccagatattcaaaaccagagccaatatc
atttcctacgtccggagatttctcgacaaccaaagattcttggaggttgagacacctatg
atgaacatgattgctggtggagcagctgcccgaccctttgtgacacatcacaatgatcta
gacatgaagctgtacatgcgtatcgcacctgagcttttcctcaagcaacttatcgtcggt
ggcttagaacgtgtctatgagattgggaagcagttcagaaacgagggtattgacctgaca
cacaacccggagttcaccacttgcgagttctatatggctttcgcagactacaacgacctg
atgaagatgactgaggatatgttgagtgacatggttaaagagttaacaggtggttacaaa
attaagtatcatgctaatgggtatgataaggagccaatcgaaatcgacttcactcctcca
ttcaggaggattgagatgataggagagttagagaaggtggctaacctcagtattccaaaa
gacttggctagcgaagaagccaacaagtatctgattgatgcttgtgccaggttcgacgtg
aaatgtccgcctcctcagactaccgctcgcctactagataaacttgttggagagtttcta
gaagtgacatgtgtgaacccaacgttcatcatcaaccatcccgagatcatgtctccattg
gctaaatggcatagatcgaacgatgttctgactgagagattcgagctgttcatcaacaaa
catgaactctgcaacgcctacaccgagctgaacgatcctgtggtccagcgtcaaaggttt
gctgatcagctcaaagatagacagtctggagatgacgaggccatggctttagatgagact
ttctgcagtgctttagagtatggattggctcctacaggtggttggggattgggcatagac
aggcttgccatgctgtttaccgactcacaaaacatcaaggaggttattctcttcccggca
atgaggccacaagacgatccagcatccgttaaagcttctttgcaagcagagaactaa
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