Brassica napus (rape): 106353201
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Entry
106353201 CDS
T04128
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 12
KO
K05391
cyclic nucleotide gated channel, plant
Organism
bna
Brassica napus (rape)
Pathway
bna04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
106353201
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bna04040
]
106353201
Ion channels [BR:
bna04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
106353201
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
106353201
NCBI-ProteinID:
XP_048593033
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Position
A7:complement(17817600..17820620)
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AA seq
653 aa
AA seq
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MNHRSSGYAGFNTGNVVRLSTVSIKSVRGWLEKMFWKMTRIVNWWKTVLFVCVLALAVDP
LFFFIPVIDSHKFCFTLDKKLGVAVCVLRTLIDVFYVIHFIFHFITERIAPRSRASLRGN
SKPIRKRLFFFYFSVDIVSVLPIPQVMVLTLLSRKQKTSLVSKEILKWAMFCQSIPRSIR
IYPIYKNGTNLYGRVALTKWVGAALNLFFYLLPSHVIGAIWYLSAVEKKETCWREACAKI
PGCDLTNLLCARGAGGDNSRFLNTSCPLIDPEQITNSTVFNFGIYTDALKSGVVETRDFP
RKLLYCFWWGLRNISALGQNLKTSNSAGEVFFAIIICVSGVLLFAGLIGNVQKYLQSTSI
RVDEWEAKKRDTEQWMPSEDLPDDLEKCIEWEKTSSIEREAHLRSLPKDLRVEAKRNLYL
YSLENVPWISFIDDDWLLNEIYDRVKPVFYSQKSYILGEGDPVKEMLIVTYGELESMTES
FETSSYSDIQIRLMKGDVWEDLLFWALDPHTSPSLPISNGTVTTLTYVEGLTLSADDLKF
LAYHLRRYHSVKLQHIKHSFRCHSKSWRSWAAFYIQAAWKAHCRRKASKILPAIKDEQQI
LQDTQRNLGATLYASRFVSKALRNRHVDSAECSSFPEMLPDKPADPEFSKKEA
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaccggagtagtggatacgcggggtttaatactggcaatgtggtgagactttca
actgtatctatcaagagtgttagaggatggttggagaaaatgttctggaagatgacacgt
attgtaaactggtggaagactgtccttttcgtttgcgtgcttgctttagccgttgatcct
ttgtttttctttatccctgtgattgattctcataagttctgcttcactttggacaagaag
cttggtgtagctgtttgtgtccttcgtactcttattgacgtattctatgtgattcacttc
atttttcattttataaccgagcgcatcgctcctcgttctcgagcctcattaagaggcaat
tctaagcctataaggaagagacttttctttttctacttcagtgttgacattgtctctgtt
ctccccattccccaggtgatggttcttactctcctctcaagaaagcaaaagacgtcactg
gtgtccaaggagatactaaaatgggctatgttttgtcaatctatacctagaagcatccgt
atctatccgatttacaaaaatgggacaaacctatatggtagggttgctctaacgaagtgg
gttggagctgctttaaaccttttcttttacttgctgccgagccatgtgattggggctatc
tggtacttgagtgcagttgaaaagaaagagacatgttggcgtgaagcgtgtgcaaagata
cccggatgtgacctaacaaatctcttatgtgcacgaggtgctggtggagacaacagtcgt
ttcctaaacacttcatgcccattaatcgatccggagcaaatcacaaattccacagttttt
aactttggcatctacactgatgcattgaaatctggggtggtagagacaagggattttcca
aggaagctcttgtactgcttttggtggggactccgaaatattagtgccttgggccaaaac
ctaaagacaagcaactctgcaggggaggtcttttttgctatcatcatttgtgtctctggt
gtactcttgtttgctgggctcattggaaatgttcagaagtacttgcaatcaactagtata
agagtagatgaatgggaggcgaagaaaagagacacagaacaatggatgccttctgaggac
ctaccagacgatctagagaaatgcattgaatgggaaaaaaccagtagcatagaaagggaa
gctcatcttcgtagtcttccaaaagacctaagggtcgaagccaaacgcaatttatacttg
tattcattggagaatgttccttggatctccttcattgatgatgattggctactaaatgaa
atttacgatcgggtgaagcctgtgttctactcccaaaaaagctacatactgggagaaggt
gacccggttaaggaaatgcttattgtaacgtacggcgaattggaaagcatgacagaatct
tttgaaacatctagctacagcgatatccaaattcgactcatgaaaggtgatgtatgggaa
gatcttctcttttgggctcttgatccccatacttctcctagccttcccatctcaaacgga
accgtaacgacgcttacctatgttgagggcttaactctctcggctgatgatctcaagttt
ctagcctaccatttgagacgctatcacagcgtcaaactccaacacatcaaacacagtttc
agatgccattcaaagtcttggcgatcatgggcagcattctacatacaggcagcatggaaa
gcacattgccgaaggaaggcttctaagatattacctgccataaaggacgaacaacaaatt
ctacaagacacacaacgcaatctgggagcaacactctatgcgtcgaggtttgtctctaaa
gctttgcgaaatcgacatgtcgattcagcggaatgttccagctttccagagatgttacct
gacaaaccagccgatcccgagttctcaaagaaggaagcatag
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