Brassica napus (rape): 106353243
Help
Entry
106353243 CDS
T04128
Name
(RefSeq) long chain base biosynthesis protein 2b-like isoform X1
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
bna
Brassica napus (rape)
Pathway
bna00600
Sphingolipid metabolism
bna01100
Metabolic pathways
Module
bna_M00094
Ceramide biosynthesis
bna_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
106353243
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bna01007
]
106353243
Enzymes [BR:
bna01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
106353243
Amino acid related enzymes [BR:
bna01007
]
Aminotransferase (transaminase)
Class II
106353243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Aminotran_5
Motif
Other DBs
NCBI-GeneID:
106353243
NCBI-ProteinID:
XP_048600294
LinkDB
All DBs
Position
C1:complement(23264129..23267262)
Genome browser
AA seq
514 aa
AA seq
DB search
MITIPYLTAVSTYFSYGLLFAFGQLRDYSRRIFDWWSTNNLHGYAPICLAHEDFYIRRLY
HRIQDCFGRPISSAPDAWVDVVERFSNDNNKTLKINHCRRTTKSTRCLNLGSYNYLGFGS
YDEYCTPLVIDSLKKFSPSTCSSRVDAGTTSVHAELEECVAKYVGKPAAIVTGMGYATNS
AIIPVLIGKVCFCCYLSCGDVTPKTYVLQGGLIISDSLNHTSIVNGARGSGATIRVFQHN
TPAHLERVLKEQIAEGQPRTHRPWKKIMVVVEGIYSMEGEICQLPEIVSICKKYKAYVYL
DEAHSIGAIGKTGRGVCELLGVDTADVDIMMGTFTKSFGSCGGYIAGSKDLIQYLKYQCP
AHLYATSISTPSAQQIISAVKVILGEDGSNRGAQKLARIRENSNFFRAELQKMGFEVLGD
NDSPVMPIMLYNPAKIPAFSRECLRENVAVVVVGFPATPLLLARARICISASHSREDLIK
ALQVISKAGDLTGIKYFPAARKKQEEVKDTIKLD
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgattacgatcccatacctaaccgctgtatcgacctacttcagctacggattgctcttc
gccttcgggcagctccgcgattactcccgccgaatcttcgattggtggagcaccaacaat
ctccatggatacgccccgatctgcttggctcatgaggatttctacatcagacgtttgtat
catcgcattcaggattgttttggacgtcccatctcaagtgcacctgatgcttgggttgat
gtcgtcgagaggttctctaatgacaacaacaagaccctcaaaataaaccattgcaggaga
acaacaaagagcacaagatgccttaacttggggtcttacaactatcttggatttggttct
tatgatgaatactgcacccctcttgttatcgactctttaaagaaattctccccaagtaca
tgcagctcccgagttgatgcagggactacatctgtgcatgcggaactcgaggaatgtgtt
gctaaatacgtgggcaaacctgctgctattgtcactggcatgggctacgcaaccaactcc
gctatcatccctgtcttgattggaaaggtttgtttttgctgctatctatcttgtggtgat
gttactccaaaaacctatgttttacagggagggctgataataagcgattctttgaaccat
acctcaattgtcaatggtgctcgaggttcaggagccactatccgtgtcttccaacacaac
acacctgctcatttggaaagagtgttgaaagaacaaatcgctgagggacaacctaggaca
cacagaccctggaagaaaatcatggttgttgttgagggtatttacagcatggaaggggaa
atttgtcaactgcctgagattgtctcaatatgcaagaagtataaggcttatgtttacttg
gatgaagctcacagcattggagcaattggaaaaacaggcaggggagtttgcgagcttctt
ggagttgacacagctgatgtggacataatgatgggaacttttaccaaatctttcggatct
tgtggtggctatattgccggatccaaggacctcatccaatatttgaagtaccagtgcccg
gctcacctttacgcaacatcaatctcaactccttccgcgcaacaaatcatatcggccgta
aaagttatcctgggagaggacggttctaacagaggtgcacaaaagttagcaaggataagg
gagaacagcaactttttcagggctgagttgcagaagatgggatttgaggttcttggagac
aatgattccccagtcatgccgataatgctttacaatcctgccaaaatcccagccttctca
agggaatgcctgcgagaaaacgtggcagttgtggttgttggtttcccagctacacctttg
ttgctagccagggctcgaatttgtatatccgcatcccactcaagagaagatcttattaaa
gctctacaggttataagcaaagcaggtgaccttaccggaatcaaatattttccggcggct
cgaaagaagcaagaagaagtgaaagataccatcaaattggactaa
DBGET
integrated database retrieval system
