Brassica napus (rape): 106353260
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Entry
106353260 CDS
T04128
Name
(RefSeq) homeobox-leucine zipper protein HDG1
KO
K09338
homeobox-leucine zipper protein
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bna03000
]
106353260
Transcription factors [BR:
bna03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
106353260
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
106353260
NCBI-ProteinID:
XP_013648430
LinkDB
All DBs
AA seq
780 aa
AA seq
DB search
MNFNGYLGDGSSDVPYSDHFSFSAAATMPHSRPFSSNGLSLGLQTNGVNGEAFETNVTRN
KSRGGEDVESRSESDNAEAVSGDDLETGDKPPRKKKKRYHRHTAKQIQDLESVFKECAHP
DEKQRLDLSRRLNLDPRQVKFWFQNRRTQMKTQIERHENALLRQENDKLRAENMSVREAM
RNPMCSNCGGPAVLGEVSMEEQHLRIENSRLKDELDRVCALTGKFLGRSPSGSHHVPDSS
LVLGVGVGSGGGFSLSSPSLPQASPRFEISNGTGLATVNIQAPVSDFDQRSRYLDLALAA
MEELVKMAQRHEPLWVRSSDTGFVMLNKEEYDTSFSRVVGLKQDGFVSEASKETGNVIIN
SLALVETLMDSERWAEMFPSMISRTSTTEIISSGMGGTRNGALHLMHAELQLLSPLVPVR
QVSFLRFCKQHAEGVWAVVDVSIDSIREGSSSSCRRLPSGCLVQDMANGYSKVTWIEHTE
YDENRIHRLYRPLLSCGLAFGAQRWMAALQRQCECLTILMSSTVSPSRSPTPISCNGRKS
MLKLAKRMTDNFCGGVCASSLQKWSKLNVGNVDEDVRIMTRKSVDDPGEPPGIVLNAATS
VWMPVSPKRLFDFLGNERLRSEWDILSNGGPMQEMAHIAKGHDHSNSVSLLRATAINANQ
SSMLILQETSIDAAGAVVVYAPVDIPAMQAVMNGGDSAYVALLPSGFAILPSAPQLSEER
NGNGSGGCMEEGGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALHCDSN
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgaattttaacggttatctcggcgacggttcttccgatgttccgtacagtgaccatttc
tcattctccgccgcagccaccatgcctcactctcgtcccttctcctctaacggcctctct
cttggactccaaacgaatggagtaaacggagaggctttcgagacgaatgtaactcgtaat
aagagtagaggaggagaagatgtagaaagcagatctgagagtgataacgctgaagctgtc
tccggcgacgatctcgaaaccggagataaacctccgaggaagaagaagaaacgttaccat
cgtcacactgctaaacagatacaagacctcgaatcggtgttcaaggagtgtgcacatccc
gacgagaaacagcgccttgatctcagccgtagacttaacttagatccaagacaggtcaag
ttctggttccagaaccgccgtactcagatgaagactcaaatcgaacgacatgagaatgct
ttgttaagacaagagaacgataagcttcgagctgagaacatgtcggtacgcgaagctatg
aggaaccctatgtgcagtaactgtggtggaccagctgttctcggcgaggtctccatggag
gagcaacacctacgcatcgaaaactcgcgtctcaaagacgagttagaccgggtctgcgcc
ttaaccggtaaattccttggccggtctccctccggttcacatcatgtaccggactcatca
ctcgtcctcggcgttggagttggatccggtggtggtttctctctctcctctccctcgttg
cctcaagcttctccgagatttgagatttccaatggtaccggtttagctacggttaacatt
caagcaccggttagtgattttgatcagaggtcgaggtatctggacttggctcttgcggct
atggaggagcttgtgaagatggctcagagacacgagccgctttgggttcggagctcggat
actgggtttgtaatgctgaacaaggaagagtacgacacaagtttcagtcgtgttgttgga
ctgaagcaagatgggtttgtgtcggaagcttctaaagaaactggaaacgttatcatcaat
agcttagcactcgttgaaaccttaatggactcggaacgatgggcggagatgtttccatct
atgatctcaagaacttcgaccacagagattatctctagtggcatgggagggacacgaaac
ggtgcacttcatctgatgcacgcagagcttcaactattgtctccactcgtgcctgtacga
caagtctcgttcttgcggttctgtaagcagcacgcggaaggtgtttgggcagtggtagat
gtctcaattgattccataagagaaggttcttcttcaagctgtagaaggttaccgtctggt
tgcctcgtacaagacatggccaatggctactccaaggtaacgtggatcgagcacacagag
tacgacgagaatcgcatccaccgcttataccgcccgttactcagctgcggtctagcgttt
ggtgcacagcgttggatggctgcgttacaacgtcaatgtgaatgcctcactattctcatg
tcctccactgtttcaccttcacgtagcccaacacccattagctgtaatgggaggaagagc
atgttgaagctagcaaagaggatgacagataatttctgcgggggcgtttgtgcatcgtcg
ttgcagaaatggagcaaacttaacgtcggaaacgtcgacgaagacgttaggattatgact
aggaaaagtgtggacgatcctggtgaaccgcctggaatcgttttaaacgctgcgacttcc
gtttggatgcccgtttctccgaagcggttgtttgatttcttagggaatgaacggttgaga
tctgaatgggatatcttatccaacggtgggcccatgcaagagatggcccatatcgctaaa
ggccatgaccattcaaactctgtctccttactccgcgccacggccattaatgcgaatcag
agtagtatgctgatactacaggagacaagcatagacgctgcaggagccgttgtggtgtac
gcgcctgttgatataccagcgatgcaagctgtgatgaacggtggagattctgcttacgtg
gcactacttccctcaggattcgccattctccctagcgctccgcaactgtcagaggaacgt
aacggtaacggtagcggtgggtgcatggaggaaggagggtcgttgctgacggtggcgttt
cagatactggtgaatagtttgcctacggctaagctgacggtggaatcagtagagactgtt
aataatctgatatcgtgtaccgttcagaagattaaagctgctcttcattgtgatagcaac
tga
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