Brassica napus (rape): 106353300
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Entry
106353300 CDS
T04128
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT3
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
bna
Brassica napus (rape)
Pathway
bna04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106353300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106353300
Enzymes [BR:
bna01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106353300
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
106353300
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
FAIM1
Motif
Other DBs
NCBI-GeneID:
106353300
NCBI-ProteinID:
XP_013648489
UniProt:
A0A078GIT3
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Position
C6:complement(29739935..29741961)
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AA seq
323 aa
AA seq
DB search
MDLDSMDCASTIDVTDDEEIHQDRHSYTSVSKHHSNNSNANAASGLLPTTTSVHELLECP
VCTNSMYPPIHQCHNGHTLCSTCKNRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYM
SLGCPEIFPYYSKLKHETVCNFRPYNCPYAGSECSVMGDIPFLVAHLRDDHKVDMHSGCT
FNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETEARN
YNYSLEVGGYGRKLIWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVT
GRIWKEQQQSGEGGGGACIPNLS
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggatttggatagcatggactgtgcttcaaccatagatgtcacagatgacgaagagatc
catcaagatcgccactcctacacatcggtttcgaagcatcacagtaataacagcaacgcg
aatgctgcttctggtcttcttccgaccaccaccagtgttcacgagcttctcgaatgtcct
gtctgcaccaattctatgtaccctcctattcatcagtgtcacaatggacatactctatgt
tcaacttgtaagaacagggttcacaatcgctgccctacttgtagacaagagctcggtgat
attcgttgcttggcactcgaaaaagtagccgagtcccttgagctaccgtgcaaatacatg
tcgcttggctgtcctgagatattcccttattacagtaagctcaaacacgagactgtgtgt
aacttcaggccttataactgtccctacgctggttccgagtgttctgtcatgggtgatatc
cctttcttagttgctcatctgagggatgaccacaaggtggatatgcattctggatgtact
ttcaaccaccgttatgtcaagtctaatcctcgtgaagtcgaaaacgccacgtggatgtta
accgtctttcactgctttggtcaatacttctgtctccactttgaggcattccagctcggt
atggctccagtctacatggcttttctgcgtttcatgggggacgagacagaagctcggaac
tacaattacagtttggaagtggggggttatggtcggaagctgatttgggaaggaacaccg
agaagcgtaagagacagtcacaggaaagttagagacagtcatgatgggctaatcatacag
aggaacatggctctcttcttctcgggtggagacaggaaagagctgaaactgcgagtcact
ggaagaatctggaaagagcagcagcaaagtggtgaaggtggaggaggagcttgtatccca
aacttgtcttaa
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