Brassica napus (rape): 106353359
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Entry
106353359 CDS
T04128
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
bna
Brassica napus (rape)
Pathway
bna03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
106353359
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bna01002
]
106353359
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106353359
03036 Chromosome and associated proteins [BR:
bna03036
]
106353359
03400 DNA repair and recombination proteins [BR:
bna03400
]
106353359
Peptidases and inhibitors [BR:
bna01002
]
Metallo peptidases
Family M67
106353359
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
106353359
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
106353359
BRISC complex
106353359
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
106353359
DNA repair and recombination proteins [BR:
bna03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
106353359
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
Motif
Other DBs
NCBI-GeneID:
106353359
NCBI-ProteinID:
XP_013648559
LinkDB
All DBs
Position
A7:complement(19017558..19019855)
Genome browser
AA seq
401 aa
AA seq
DB search
MALTCVNMSEDVWLTCLTHALSTETEEIMGLLLGDIQYSKNGSATAMIWGASPQSRSDRQ
KDRVETNPEQLAAASAQAERMSISTGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLD
SGFIGLIFSCFSEDANKIGRIQVIAFQSSDGNSNTPPKSMSLVLSNKDSVIDLESSLSSS
DSVYQSSSSAKGHNHDQDTTDTASSSGPKGGGRVSDFGAFFVKNAEAKATGTSGNYSSAV
EIDSMDMSESMQEAMLRSNLETSGVGYVKKEVPLHVLPTSSLLQLNSPLASFKDLQRVLY
EEERAAYHQSVLQSMRNGKVHPLAFIHNTSTYQASMCKLIEYCLSPAVNALQDRLRENKI
RLAMLMSEAEGLEAQKLKGPETSGGTSRLVHGSGSRSRRGS
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggctctgacatgcgtgaatatgtcggaagatgtgtggttaacttgcctgactcacgca
ttgtccaccgagaccgaagagatcatgggtctcctcctcggcgacatccagtactcgaag
aacggaagcgcgacggctatgatatggggagcatcgccgcagtcaaggtctgataggcag
aaggatcgtgtagaaaccaaccctgaacagctggctgctgcttctgctcaggctgagaga
atgagcatatcaacggggagaacaacacgtgtgattggatggtatcactcccatcctcat
atcaccgtccttccttcccatgtcgatgttcggacacaagcaatgtatcagcttcttgat
tctggttttattggcctcattttctcctgttttagtgaagatgctaacaagattggtaga
atccaagttatcgctttccagtcctctgatgggaactccaacactcctcctaaatcaatg
agcctggttctttcaaataaagactctgtcatcgatctagagtcctctttaagctcttca
gactcagtataccagagttcctcttctgctaagggacacaatcatgaccaagacacaact
gatacagcttcatcttccggacctaagggtgggggacgagtttcagattttggggctttc
tttgttaaaaatgctgaggccaaagccaccgggacgagtggaaactacagctcagctgtg
gaaattgattcaatggacatgtctgaaagcatgcaagaagccatgctccgttccaacttg
gaaactagtggtgtggggtacgttaagaaagaagtcccgcttcatgttttaccgacttca
tcacttcttcagctcaattcacctttagcctcttttaaagatctacaacgagtgctctac
gaggaggaacgagcagcgtaccaccaatcagtcctgcaaagcatgagaaatgggaaagtt
catccccttgctttcattcacaacacatcaacatatcaggcttccatgtgcaagctgatc
gagtactgcttgagtcctgcggttaacgcacttcaagataggctgagggaaaacaagatc
cggttagcaatgctgatgagtgaagctgaaggtctggaagcacagaaacttaaaggaccg
gaaacgagtggagggacatctcgtttggttcatggttctggcagccgaagcagaagagga
tcctaa
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