Brassica napus (rape): 106353375
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Entry
106353375 CDS
T04128
Name
(RefSeq) nuclear pore complex protein NUP96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
bna
Brassica napus (rape)
Pathway
bna03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106353375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106353375
03036 Chromosome and associated proteins [BR:
bna03036
]
106353375
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106353375
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
106353375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
DUF3144
Motif
Other DBs
NCBI-GeneID:
106353375
NCBI-ProteinID:
XP_013648578
LinkDB
All DBs
Position
A7:19120159..19124615
Genome browser
AA seq
1042 aa
AA seq
DB search
MASLSILPAPEISTMATSLDSRKKRRISLDEDSMVSEHYEGIRDSFPSLSSLDYFLKPSM
NELVEREIESPGYCSRVPDFTIGRIGYGFIKFLGSTDVRKLDLDQIVKFRRHEVVVYDDE
SSKPAVGEGLNKAAEVTLFVDIACGKERAGHVSSKLQQSAERQGATFISFDPEDGLWKFL
VPHFSRFGLSDDEAEDMATDDNTPGLESRVGLNGDMVVADIDKMETSEPELSHSLPAHLG
LDPGKMREMRMLMFPNEDLDESEDLRDQTSFHMTSLSKQNARPSQRSSQRSSHQDTPPVV
RKTPLALLEYNPGNDKSSPGSILMVQQNKNLAVRKSKMGGFELDISHETPVTDNYSRNVV
DAALFMGRSFRAGWGPNGVILHTGKPIGSSSSQRVLSSVISVEKVAVDKVVRDKKEKVQK
ELIDSAFETPLSLHRELYHEEDEVRFGSFSLKLQRVVTDRVVLSDICRNYIDIIEKQLEV
PGLSTSAKLFSTHQVMVWELIKVLFSERQSTERLSYAASDNEEDMMQDVKEESAEVDTEA
LPLIRRAEFSCWLQECVSHRVQEDVNDLNGSGYLEHLFFLLTGRELDSAVELAVSKGDVR
LACLLSQAGGSTVNRNDIMQQLHLWGRNGLDFNYIEKDRVKLYELLAGNIHNALQDFAID
WKRFLGLLMWHHLSPDSSLPVIFRNYQLLLDQEKAPWPVPIYIDEGTADGVVSNTNHSDI
LYYLMLLHSREEEEIGFLKTMFSVFSSTDDPLDYHMIWHYRGILEAVGAFTSDDLHAIDM
GFVAQLLSQGLCHWAIYVVLHIPYRKDQPYLHVIVIREILFQYCETWSSMESQRQFIKDL
GIPSEWMHEALAVYYNYNGDFLKALDHFIECANWQKAHSIFMTSVAHSLFLSANHSEIWR
IATSMDDRKSEIENWDLGAGIYMSFYLLKSSLEEDADTMLELDSPESRNESCRSFVGRLN
ESLAVWGDRLPVESRVAYSKMAEEICELLLSGLSVYPDRDSQLSCFVTAFKAPLPEDVRS
SHLQDAVSLFSLYLSETGQAPA
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctctttctattcttccagctccagagatttcaacgatggctacaagtttggac
tcacgaaagaaaagaaggatctctttagatgaagattctatggtatctgaacattacgaa
ggcatcagagattcgttcccttcgttgagttcactcgactacttcttgaagccgtccatg
aacgagctggtggagcgagaaattgaaagccctggttattgcagccgtgttcctgatttc
actattgggaggattggttacggttttataaagtttcttggaagtacagatgttagaaag
ttagatctggatcagattgttaagtttcgaaggcacgaggtggttgtttacgatgatgag
agctccaagcctgctgttggcgaggggcttaacaaggctgctgaggtcactctgttcgtg
gacatagcttgtgggaaagagcgggctggccatgtttcttctaagttacaacagagtgct
gaaagacaaggggcaacattcatctcatttgatcctgaggatggtttatggaagtttctg
gttcctcatttcagcagatttgggttgagtgatgatgaggcagaagatatggctacggat
gataataccccaggtttggagagtcgtgtaggattgaatggggatatggtggttgctgac
attgataaaatggaaacttctgagccagagctttctcattctcttccggcccatctggga
cttgatccaggaaagatgagagaaatgaggatgcttatgtttcctaatgaagatcttgac
gaaagtgaggatcttagagatcaaacttcctttcacatgacatccttgagtaaacaaaac
gcaagaccttcacagagaagttctcaaagaagtagtcatcaagatactccaccggttgtg
aggaaaacaccgcttgctttgctggagtataaccctggtaatgataaaagctctccaggc
agtatcctgatggtccaacaaaacaagaacttggcagtgaggaagtcgaaaatgggaggt
ttcgagcttgacatcagccatgagacgccagtaactgataattattcccgtaatgttgta
gatgcagcgttgttcatgggaaggtcgttccgtgcaggttggggcccaaatggcgtcatt
cttcacactggcaagccaataggcagttctagttcccagagagtattgtcttctgtgatc
agtgtagaaaaggtagcagttgacaaagtcgttcgagataaaaaggaaaaagttcagaaa
gaacttattgactctgcctttgagactcccttaagcctccacagggaattatatcatgaa
gaagatgaagtcaggtttggctcttttagtcttaagcttcagagagttgtcactgatcgt
gtggttctttcagatatctgccgaaactatattgatataatcgagaaacagctggaggtt
cctgggttgtccacctcagcgaagctgttttcgactcaccaagtcatggtgtgggaactc
ataaaagttctcttttctgagagacagagtactgaacgtttgagttatgcagcttcggat
aatgaggaagacatgatgcaggatgtgaaagaagagtctgcagaagttgatacagaagct
cttccacttatccgaagagcagaattcagttgctggctccaagagtgtgtcagtcaccgt
gtacaagaagatgtgaatgatttaaatggttctggctaccttgagcacttgttctttctt
cttactggacgagagcttgattcagctgtggaacttgccgtatctaagggagacgttaga
ctcgcttgtttgttgagccaggctggtggttcaactgtaaaccgcaatgatatcatgcag
cagcttcacctttggggaaggaacgggctggattttaactacattgagaaggatagagta
aagctgtacgaattgcttgctggtaatatccacaatgcgttacaagattttgcaattgac
tggaagagattcctagggctgttaatgtggcatcatctgtctccggacagttcattgcct
gtcatcttcagaaattatcaactcctattagatcaggagaaagctccctggcccgtccca
atatatattgacgaaggaactgcagatggcgttgtaagcaacaccaaccattctgacatc
ttgtattatcttatgcttctacacagcagagaagaggaagaaattggttttctgaagacc
atgttcagtgtcttctcttcaactgacgatcctcttgactatcatatgatctggcactac
cggggaatcttagaagcagtgggagctttcacttcagatgaccttcacgctatcgatatg
ggatttgttgcacagcttctctctcagggcctttgccattgggctatctacgttgttctt
cacataccctaccgcaaagatcaaccatatctacacgtcattgtcattcgagaaatcctg
tttcaatactgtgaaacttggagttctatggaatcacagcggcaatttatcaaggacttg
ggtatcccttccgaatggatgcacgaagctctggcagtttattacaattacaacggagat
ttcttaaaggctcttgaccacttcatcgaatgcgcaaactggcaaaaagctcattccatt
tttatgacatcagttgctcattcattgtttttgtcagctaaccattcagaaatatggaga
attgccacgtcaatggacgatcgcaagtctgagattgaaaactgggacttgggtgctggg
atttacatgtctttctatttactaaagagttctttggaagaagatgctgatacaatgcta
gaactggattcccctgagagcagaaacgagtcgtgcagaagttttgtcggtcgtttaaac
gagtcattggctgtttggggtgatagattaccagttgagagcagagtcgcatactcgaag
atggcagaggaaatctgcgagttgcttctgtcaggtctgagtgtgtatcctgatagagac
tctcagctaagctgttttgtgacagccttcaaagctcctttaccagaagatgtaagatca
tcacatctgcaagatgctgtctctctcttctctctatatctctcagagacaggacaagca
ccagcttag
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integrated database retrieval system
