KEGG   Brassica napus (rape): 106353396
Entry
106353396         CDS       T04128                                 
Name
(RefSeq) ubiquitin receptor RAD23b
  KO
K10839  UV excision repair protein RAD23
Organism
bna  Brassica napus (rape)
Pathway
bna03420  Nucleotide excision repair
bna04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    106353396
  09124 Replication and repair
   03420 Nucleotide excision repair
    106353396
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:bna03051]
    106353396
   03400 DNA repair and recombination proteins [BR:bna03400]
    106353396
Proteasome [BR:bna03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    106353396
DNA repair and recombination proteins [BR:bna03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      106353396
SSDB
Motif
Pfam: UBA XPC-binding ubiquitin UBA_7 CUE Rad60-SLD UBA_3 MmeI_C TECR_N Dsc3_N CytochromB561_N HEPN_Toprim_N UBA_RAD5A DUF515 Rad60-SLD_2 Med13_C
Other DBs
NCBI-GeneID: 106353396
NCBI-ProteinID: XP_013648605
LinkDB
Position
A7:19219896..19222856
AA seq 362 aa
MKLTVKTLMGRQFEIRVQSSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETTLV
ENKVTEEGFLVVMLSKSRTAGSSTGQSSTQPASTSTTTTSSTKPAAPSTTQSTAVPASPV
SAQEQPAAQTDTHGQAASSLASGNLLEPLVQQLMDMGGGSWDKETVTRALRAAHNNPERA
VDYLYSGIPETAEVAVAGSGAAPVPPASGGPNSSPLDLFPQGTVAAAGTGDLGTLEFLRN
NDQFQQLRTMVHSNPQILQPMLQELGKQNPQLLRLIQENQAEFLQLVNEPYEGSDGDADI
FDQPEQETPHSINVTQAEQEAIQRLEAMGFDRDLVIEAFLACDRNEELAANYLLENSGDF
AD
NT seq 1089 nt   +upstreamnt  +downstreamnt
atgaagctcaccgttaagactctcatgggtcgtcagtttgaaattagggttcagtcctcc
gatacgataatggcggtgaagaagaatatagaggattcacaagggaaggataattaccca
tgtgggcagcaactgttgattcacaatggaaaagttttgaaagatgaaactactttggtc
gagaacaaagttactgaggaaggctttcttgtcgtcatgcttagcaagagcagaactgca
ggttcatcaactggtcagtcgtcgactcagcctgcttccacttctactactacaacatct
tcgactaagcctgcagctccatctacaactcagtctacagctgtgcctgcttcacctgtt
tctgctcaagaacaaccagcggcacagactgacacgcatgggcaagctgcttcatcattg
gctagtggcaatcttcttgagccattggtgcaacaattaatggacatgggaggcggaagc
tgggacaaagaaactgttactcgtgcacttcgtgctgctcataacaaccctgagagagca
gtggattatctgtactctgggattcctgaaactgctgaagtcgctgtggcagggtctggt
gcagcccccgtcccacctgcatctggaggtcctaactcatctcctttggatttattccct
cagggaacagttgcagctgctggcactggtgatcttgggacgcttgaatttcttagaaac
aatgatcagttccagcaattacgcaccatggtccattccaaccctcaaatcctccagcca
atgcttcaggaacttggaaagcaaaatcctcaacttctaaggctaatccaagagaaccag
gcagagtttcttcagttagtaaacgagccttatgagggatctgacggggatgcggacatt
ttcgatcaacccgagcaagaaacaccacattccattaacgtcacccaagcagaacaagaa
gcgattcaacggctagaggcaatgggatttgatagagacttagtaatagaagcctttctt
gcatgtgaccgtaatgaggaattggcagctaactatctattggagaactcgggagatttc
gcagactga

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