Brassica napus (rape): 106353413
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Entry
106353413 CDS
T04128
Name
(RefSeq) nuclear-pore anchor-like
KO
K09291
nucleoprotein TPR
Organism
bna
Brassica napus (rape)
Pathway
bna03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106353413
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106353413
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106353413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
TolA_bind_tri
Motif
Other DBs
NCBI-GeneID:
106353413
NCBI-ProteinID:
XP_048591685
LinkDB
All DBs
Position
A7:19308620..19321586
Genome browser
AA seq
2078 aa
AA seq
DB search
MPLFMPDDELARLSNDAASVVAERADEYIRKLYAELDSVRAKADAASITAEQTCSLLEQK
YLSLSQDFASLESQNARLQSDLDDRLSELAQSQAQKHQLHLQSIGKDGELERITTEMSEL
HKSKRQLMELLEQKDSEISEKNSNIKSYLEKIVKLTDASSEKESRFAEASAELARSQAMC
FRLSQEKELMERHTKWLDEELTSKVDSYAELRRRHSDLEAEMSAKLLDVEKNYNECSSSL
NWHKERLRELETKITSLQEELSSCKDAATTTEEQYSAELLTANKLVELYKESSEEWSRKA
GELEGVIKALEARLSQVESGYKDRLEKEMSTNQKLEKENEDIKQKLEKCEAEIEKTRKTD
ELTLIPFSSFTRGVDISGTSNTIVESHEIISKVPAGVSGTALAASLLRDGWSLTKIYEKY
QEAVDAMRHEQLGRKEAELILQRVLSELEEKAGFIQEERGEHERLVEAYSLVSRKLQDSV
SEQSNMEKVIVELKADLRRRERENILYQKDISDLQKQVTILLKECRDVQLRCGAAGDEEE
DDTQLSDVEMDMESEADKIISEHLLKFKDINGLVEQNVKLRNLVRSLSEQIESREMELKE
KYEIDLKKKTDEASSKVAIVLERAEEQGKMIESLHASVAMYKRLYEEEQKLHSSNSRSSD
PPPDVVPGRKNFLHLLEDSQEATKRAQEKTFERIRSLEEDLAKARSDIIAIRSERDKLAM
EANFAREKLEGIMKESERKREEMNSVLARNIEFSQLIIDHQRKLRESSESLHAAEGISRK
LSMEVSVLKQEKEVLSNAEKRASDEVSALSQRVYRLQATLDTIQSTEEVREEARAAERRK
QEEHIKQLEKEWAEAKKELQEERSNARNSTSDRNQTLNNAVRQVEEMGKELANALKAVSA
AESRASVAEARLSDLEKKIRSSDPKVRDMDSGGVVSLSDNEISIDLHTAKEEMEKLRGEV
ESSKSHMLQYKSIAQVNETALKQMESAHENFRIEAEKTQKLLEAELVSLRERVSELENDC
IQKSEQIASAAAGKEDALVSASAEIASLREESLVKSSQIEAINIQMSILKNDLEKEHEKW
RLAQRNYERQVILQSETIQELTKTSQALASLQEEASELRKLADARGTEISELTSKWSEEK
FMLEQQKNLAEKNYHDLNEQNKILHSRLEAMHLHSAEKDSRSGKISSESTGSDQLGDSGL
QSVVNYLRRTKEIAETEISLMRQEKLRLQSQLESAVKMAESARGSLNAERSSTRASLLTE
DEIKSLQLQVNEMNLLRESNMQLREENKHNFEECQRLREVSQKARTDFENSENLLKQKQT
ELDLCMKETEKLRKEIDLQKRRVDELRETYKNIDVADYNRLKDEMRQFEDKLKGKDAHIE
EIKKLVLEKENKISLLEKDLTNCKNELREREKDRTKCKTELGEREKRLDAAQQAQVTMQS
EIENLKAEITKLKGDSERLRKSFTNIKRKLDKEKDDLNRENQSLSKQLEEAKEAGKRTTS
DATAEQAVKERDEKEQKIQILDKFVHSLKDDLKKKDDELTKEKTERKSVEKVFGDSLAKI
KQEKTKVDEELVKLERYQTALAQLSEELDKLKQADGNLPEGTSAVQALSGSVLNDQAAAY
VSAVDYFERMVRTIVQNSQGSTKSTGTVTEASPATVEPSAIVKASPSKAPVATTQQPPKE
KRLVSLKPSAELRRPIRRIKRPQFSKPEEPPQADVEMPEAEGAGDEGKQPSSSVTESQVT
TMPPPVQTHVRKRHADPLASEPQQGTQGETSSEIAPPAPKKPKGSESQPDTTEGETLPKE
PDVDESMDPTSAAEDDNEEETEAETAEEKTEETTEAQQESEAEVQEKADEPVEENPTETE
TIPTEEEFKDQTEQENQDLLTDVEFDKEEGELDLDTLEDLEEAKDVITPTQSPIRIETTT
EEAETTIEPPVEDAKNDEGAAEEASDKPNNGHNQQVEETDLKPETTIATTVAASTSSTPA
SASPSETQETEETKRAASPSRTINIADKAKEQAALRQAGVATLGGTRTPSPGNRAASSSL
LRGRGRVVNTRGGNRLNTRGGRTPRGGGGGRGQPPSQP
NT seq
6237 nt
NT seq
+upstream
nt +downstream
nt
atgcccttgtttatgccagacgatgagcttgcgcggctatcaaacgacgccgcgtcggtg
gtcgcagagagagccgacgagtacatcaggaagctgtacgccgagttggacagtgtgcgt
gccaaggccgatgctgcttccatcacggcggagcagacgtgctcgcttctcgagcagaag
tacctctcgctctctcaggatttcgcgtcgcttgaatctcagaacgcgaggcttcagtct
gatctcgatgatcgattatctgagctcgcgcagtctcaggcgcagaagcaccagcttcat
ttgcaatctattgggaaggatggagagttggagaggataacgacggagatgtcagagctg
cataagtccaagaggcaactgatggagttgctggagcagaaagattctgagattagcgag
aagaattcgaatatcaagagctatttggagaagattgttaagctgactgacgctagttcg
gaaaaggagtctaggtttgctgaagcaagcgctgaattggcacgttcgcaagctatgtgc
tttcgtttgtctcaggagaaagagctcatggaaaggcatactaagtggcttgatgaggag
ttaacatctaaagttgatagttatgctgaactccgtaggaggcattctgatcttgaggct
gaaatgtcagcgaagcttttggacgttgagaaaaactataatgaatgctctagttcgttg
aattggcataaggaaagattgagagagctcgaaacgaagattacttcattacaagaggaa
ctcagctcgtgcaaagatgcagcaacgacgactgaagagcaatacagtgctgaacttctc
actgcaaacaagcttgttgagctgtacaaggaaagttcggaggaatggtctagaaaggct
ggggaacttgagggtgtcattaaggccttagaggcacgcttgagccaagtcgagagtggg
tataaagatagacttgagaaagaaatgtctacgaaccagaagttggagaaggagaacgaa
gacattaaacaaaaacttgagaagtgtgaagcagaaattgagaaaactcgaaaaacagat
gagctaacgcttataccattcagcagtttcacaagaggggttgacatttctgggaccagc
aacacgatagtggaaagccatgaaataatttccaaggttcctgctggtgtgtcaggaaca
gcactggcagcttcactcctacgtgacggatggagtctgaccaaaatttatgagaagtat
caagaggctgttgatgctatgaggcatgaacaattaggtcgaaaggaagcggagttgata
ctacaacgggttttatccgaactagaagagaaagctgggttcatccaagaggaaagaggt
gagcatgagcgtttggttgaagcttactctctagtcagtcgaaaactacaggattctgtc
tctgaacaatcaaatatggagaaagtcatcgtggagctaaaggctgacttgaggaggcgg
gaacgtgaaaatattctgtatcagaaagatatatctgacctacagaagcaggtaactata
ctactgaaggagtgtcgtgatgtccaacttcgctgtggagctgccggggatgaggaagaa
gatgatactcagctttctgatgttgagatggatatggaatctgaagctgataaaataatt
tcagagcatcttttgaagtttaaagatataaatggattagttgagcagaatgttaagctc
aggaatcttgttcgtagtctctcagagcagattgaaagtagggaaatggagttgaaggag
aagtatgagatagacctgaagaaaaagactgatgaagcttcttccaaagtagccatcgtg
ctagaaagagccgaagaacagggtaaaatgattgaatcactgcacgcatctgttgcaatg
tataaacgactatatgaagaggaacagaaacttcattcatctaattctcgttcttcagat
ccgcctccagatgtagtgccaggaaggaagaacttcttacatctgcttgaggattcgcag
gaagctactaagagagcccaagaaaaaacatttgaacgcattcgaagtctggaagaagat
ttagcgaaggctaggagtgatataattgcgataaggtctgaacgggataagttggccatg
gaggcaaattttgctagggaaaaactagaaggcatcatgaaagaatctgaacgcaagagg
gaagaaatgaacagtgttttggcaagaaacatagagttctcgcagctgatcatcgaccac
caacggaagttacgtgagagttctgagtctctgcatgcagcggaagggatttctagaaaa
ttatctatggaggtatcggttcttaaacaagaaaaagaggtgttatcaaatgctgaaaaa
agagcctctgatgaagtttctgctttatctcagagagtttatcgccttcaggctaccttg
gatactatacagagtacagaggaagttcgtgaggaagcaagagccgccgagagaaggaaa
caagaggagcatatcaagcaacttgagaaagaatgggctgaagctaaaaaagaattgcaa
gaagaaaggagcaatgcgcggaatagcacttcggaccgcaatcaaactttgaacaatgct
gttaggcaggtcgaagaaatggggaaagaattggctaatgccttgaaggctgtctcggca
gcagagtccagggcttctgtggctgaggctagactttctgatttggagaagaagataaga
tcttcagatcctaaggttcgtgatatggacagtggtggagtcgtctctctttctgataat
gagatatccatagacctgcacactgctaaggaagaaatggaaaagttgaggggagaagta
gaatctagcaaaagccacatgcttcagtacaagagtatagctcaggtgaatgaaacagct
ttaaagcagatggaatctgcccacgagaacttcagaattgaggctgaaaagacacagaaa
ttgttggaagcagagcttgtttctcttagggaaagggtttcagaacttgaaaacgactgt
atacagaaatcggagcaaatagccagtgctgctgcaggaaaagaagatgctcttgtatca
gcatcagctgaaattgcaagcctgagagaagaaagcttagttaaaagttcccaaatcgaa
gcaattaatatccagatgtccattttgaaaaatgacctggagaaggaacatgagaaatgg
cgtcttgctcagagaaattatgaaagacaggttattctgcagtctgaaactattcaagag
cttacgaaaacatcacaggctttggcttcccttcaagaggaggcatctgaacttcgtaaa
ttggctgatgcaaggggaacggaaatttccgagcttacctccaagtggagtgaagagaaa
tttatgttagagcagcaaaagaatctagcggagaagaactatcatgatctcaacgaacag
aacaaaatactgcatagccgacttgaggctatgcatcttcactcggctgagaaagatagc
cgttctggaaaaatatcatctgaaagcactggctcagatcaacttggagattctggtttg
caaagtgtagttaattatttgcgcagaacgaaggaaatagctgaaacagagatatcactt
atgagacaggaaaaattacggttgcaatcgcaacttgagagtgccgtgaagatggcagag
tctgcccggggttcacttaatgctgagcgttccagtacaagagcctcattattgactgag
gatgaaatcaaatctcttcagcttcaggtcaatgagatgaacttgctccgtgaaagcaac
atgcaactcagggaggaaaacaaacacaattttgaggagtgccagagactgcgtgaagta
tctcaaaaggctaggacagatttcgaaaactcagaaaatctattgaagcaaaagcaaacc
gagttagacttgtgtatgaaagagacggaaaagctaaggaaggagatagatcttcaaaaa
aggagggttgatgagttgcgagagacgtataaaaacattgatgttgctgactacaatcgc
ctcaaagatgaaatgcggcaattcgaggataaactgaaagggaaagatgctcatattgag
gaaatcaagaagcttgtgttagagaaggagaataagatatctctactagagaaggatcta
acaaactgcaaaaatgaactgagggagagggagaaggatcgaacaaaatgcaaaacagaa
ctgggtgagagggagaagaggttagacgctgctcagcaagcacaggtgactatgcagtca
gagattgagaatctaaaagcagagattactaagctgaaaggagattccgaaaggttgaga
aaatcttttactaacattaagagaaagctcgataaagaaaaggacgacttgaacagagaa
aaccagtcgctatctaaacaattagaggaagccaaagaggctggaaagagaacaacatct
gatgctacggcggagcaggccgttaaggagagagatgaaaaagaacaaaagattcagata
ttggataagtttgttcattcactgaaagacgacctgaagaagaaagatgacgaattaact
aaagagaaaacagaacgcaagtctgttgagaaagtatttggagactccttggccaaaatt
aaacaggagaaaacaaaagtggatgaagagcttgttaagctcgagaggtatcagacggca
ttggctcaactctctgaagaattggacaagttgaagcaagctgatggaaatctgcctgag
ggtacttcagctgtccaggctctctctggaagcgtattgaatgaccaagccgctgcgtac
gtatcagctgtagactattttgaacgcatggttcgtactattgtccagaattctcaaggt
agcacaaaatctactggtacggtgactgaagcttcccctgctacagttgagccttcagcc
attgtcaaagcctctccttcaaaagctccggtggcaactacccagcagccacccaaagag
aagagattggtttcgctgaaaccaagcgctgagctccgcagaccaataaggaggattaaa
cgtcctcagtttagtaaaccagaggaacctcctcaagctgatgttgagatgccagaggct
gagggagctggtgatgaaggaaaacagccttcctccagtgttacagagagccaagtaacc
acgatgccaccacctgtccagacacatgtccgtaaacgccacgccgatccgttggcttct
gagccacaacaagggactcaaggggaaaccagttcagaaattgcaccacctgcgccgaag
aagccaaaaggatccgagtcacaacctgatactaccgaaggtgaaaccctccctaaagag
ccggacgtggatgaatccatggatccgacttctgccgctgaggatgacaatgaagaagaa
acagaagccgagactgcagaggagaaaacagaggaaactacggaagcacaacaagaaagt
gaagctgaagtgcaggagaaagctgatgagccagtagaagagaatccaactgagacagaa
accattcctaccgaagaagagtttaaggatcagaccgaacaagagaatcaagatcttctg
acagacgtggaatttgataaagaagaaggagagctcgatctagacactctggaagatctc
gaagaggccaaggatgtaattacacccacgcagtcaccaattaggatagagacaacaacg
gaggaagctgaaacaaccattgaaccaccagtagaagatgctaagaacgatgaaggagct
gctgaagaagcctctgataaacccaacaatggtcacaatcaacaagtagaagaaaccgat
ctcaagccagagaccacaatagctacaactgtcgcagcatccacttcctctactccagct
tctgcaagtccaagcgaaactcaagaaactgaagaaacgaagagagcagcgtcgccaagt
agaactattaatatagctgataaagcaaaagagcaagcagctctaagacaagccggagta
gctactctaggtggaacccgaactccttcaccaggcaaccgagctgcttcatcatccctc
ctcagaggtcgtggccgagttgtaaacactcgaggaggaaatcgactgaatactcgtggt
ggccgaaccccacgtggaggtggtggtggacgtggacaacccccgagccagccgtga
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integrated database retrieval system