KEGG   Brassica napus (rape): 106353454
Entry
106353454         CDS       T04128                                 
Name
(RefSeq) inactive squalene synthase 2
  KO
K00801  farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21]
Organism
bna  Brassica napus (rape)
Pathway
bna00100  Steroid biosynthesis
bna00909  Sesquiterpenoid and triterpenoid biosynthesis
bna01100  Metabolic pathways
bna01110  Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:bna00001]
 09100 Metabolism
  09103 Lipid metabolism
   00100 Steroid biosynthesis
    106353454
  09109 Metabolism of terpenoids and polyketides
   00909 Sesquiterpenoid and triterpenoid biosynthesis
    106353454
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:bna01006]
    106353454
Enzymes [BR:bna01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.21  squalene synthase
     106353454
Prenyltransferases [BR:bna01006]
 Terpene biosynthesis
  Squalene/phytoene synthase
   106353454
SSDB
Motif
Pfam: SQS_PSY
Other DBs
NCBI-GeneID: 106353454
NCBI-ProteinID: XP_013648704
LinkDB
Position
A1:complement(1929825..1932692)
AA seq 418 aa
MGSLSTILRHPDEIYPLLRLKLAIMKAQNQIPLDDPHLAVCYSLLQKVSRSFSLVIQQLG
TELRDAVCVFYLILRALDTVEDDTSIPIEIKVPILLAFHRHIYDRDWHFTCGTKEYKVLM
DQFHHVSAAFLELEEGYQEAIEDITKRMGAGMAKFISKEVETVDDYDEYCHYAAGLVGLG
LSKLLLTSGLETLTPDWQQISNSTGLFLQKTNIIKDYLEDINEIPKPRMFWPREIWGKYV
DKLEDLKNEEKSTKAVQCLNEMVTNALIHVEDCLKSMAGLRDPAIFKSCAIPQIVAMGTL
ALCYNNVQVFRGAVKLRRGLIAKVIDRTKTMGDVYGAFYDFSCMLKTKVDKNDPNAMKTL
QRLETIEKVCRENGDLHKRKSYVNDETQSKALLFLMLVPLLALLVLAYLKHTHINASD
NT seq 1257 nt   +upstreamnt  +downstreamnt
atgggaagcttgagtacaattctgagacaccctgatgagatttatccactcttaaggttg
aaacttgctattatgaaagctcaaaatcagatccctcttgatgatccacacttggctgtc
tgttactcattgctccaaaaagtttctagaagcttctctcttgttattcaacaattaggc
accgagcttcgcgacgccgtgtgtgtgttctacttgattctccgtgctcttgatactgtt
gaggatgacacaagcataccaatcgagatcaaggtgcctattttgctagctttccaccgt
catatatacgatcgtgactggcattttacatgtggtacaaaggagtacaaggttctaatg
gaccagtttcaccatgtttctgcagcttttctggaacttgaagaagggtatcaagaagct
attgaagatataactaaaagaatgggtgcaggaatggccaaattcatttccaaggaggtt
gaaacggttgatgattatgatgaatactgccattatgctgctggacttgtgggtttaggt
ttgtcaaaactcttgctcacttcaggattagaaacactgactccagactggcagcagatt
tccaattctacaggtttatttctccaaaaaacaaacattatcaaagattaccttgaagac
attaatgagataccaaaaccgcgcatgttttggcctcgtgagatttggggaaagtatgtt
gacaagctcgaggacttaaaaaatgaggagaaatcaacaaaagcagtgcagtgcttgaat
gaaatggtcactaatgcattgattcatgttgaagattgtttgaaatctatggctggattg
cgtgatcctgcaatatttaagtcttgtgccatccctcagattgtggcgatgggaacactt
gcattgtgctataacaatgtacaagtatttagaggtgccgtgaaactgaggcgaggtcta
attgccaaagtgattgatcgcacaaagacaatgggtgatgtctatggtgcattctatgat
ttttcttgcatgctaaaaacaaaggtggacaagaacgatccaaatgccatgaaaacactt
caacgactggaaaccattgagaaagtctgcagagaaaatggagaccttcacaagagaaaa
tcttatgttaacgacgaaacacaatcaaaggctctcttgtttttaatgcttgttccccta
ctggccttactagttttagcgtatctaaaacacacacatattaacgcaagtgactga

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