Brassica napus (rape): 106353478
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Entry
106353478 CDS
T04128
Name
(RefSeq) long chain acyl-CoA synthetase 9, chloroplastic-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
bna
Brassica napus (rape)
Pathway
bna00061
Fatty acid biosynthesis
bna00071
Fatty acid degradation
bna01100
Metabolic pathways
bna01212
Fatty acid metabolism
bna04146
Peroxisome
Module
bna_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
106353478
00071 Fatty acid degradation
106353478
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
106353478
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
bna01004
]
106353478
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bna04147
]
106353478
Enzymes [BR:
bna01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
106353478
Lipid biosynthesis proteins [BR:
bna01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
106353478
Exosome [BR:
bna04147
]
Exosomal proteins
Exosomal proteins of breast milk
106353478
Exosomal proteins of breast cancer cells
106353478
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
106353478
NCBI-ProteinID:
XP_048591708
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Position
A7:19687476..19690890
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AA seq
693 aa
AA seq
DB search
MIPYAAGVIVPLALTLLVRNAKKDKKRGVVVDDVGGEPGHTVRNHRFKDPVSSHWEDIST
LPELFEISCKSHSERFFLGTRRLIAREVETSEDGKVFEKLHLGDYEWKTFGETLDAVCSF
ASGLVQIGHKSEERVAIFADTREEWFIALQGCFRRNVTVVTIYSSLGEEALCHSLNETEV
TTVICGNKELKKLMDISQQLETVKRVICMDDEFPSEASSTWTTTSLADVQKLGRESPVDP
SFPLSADVAVIMYTSGSTGLPKGVMMTHGNVLATVSAVMTIVPDLGKRDTYMAYLPLAHI
LELAAESVMATIGSAIGYGSPLTLTDTSNKIKKGTKGDVTALKPTIMTAVPAILDRVRDG
VRKKVDAKGGAAKKLFDFAYARRLSAINGSWFGAWGLEKLLWDVLVFGKIRAVLGGQLRY
LLSGGAPLSGDTQRFINICVGAPIGQGYGLTETCAGGTFSEFDDTSVGRVGAPLPCSFVK
LIDWPEGGYLISDKPMPRGEIVIGGSNITLGYFKNEEKTKEVYKVDEKGMRWFYTGDIGQ
FHPDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALSISPYVENIMVHADPFYSYCVALVVA
AQQTLEGWASKQGIEFTNFEELCAKEQAVKEVYASLVKAAKQSRLEKFEIPAKIKVLAAP
WTPESGLVTAALKLKRDVIRKEFSEDLTKLYAS
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgattccttacgctgctggtgtcattgtccctctagctttaacccttctggtccgcaac
gctaagaaagacaagaaacgaggcgtggtcgtcgacgacgtcggtggagagccaggtcac
accgttaggaaccacaggttcaaagatcccgtcagctctcactgggaagacatctccact
ctccccgagctattcgagatctcgtgcaaaagccacagcgagaggttcttccttggcacc
aggaggctgatcgctagagaggtcgagactagcgaggacgggaaggtctttgagaagctt
catttgggtgactacgagtggaagacgttcggggagacgcttgacgctgtgtgtagtttc
gcttctggtttggttcagattgggcacaagtctgaggagcgtgttgctatttttgcggat
acgagagaagagtggttcattgcgttgcagggttgtttcaggcgcaatgtcactgtggtt
actatctattcgtctttaggagaggaagctctttgtcactcgcttaatgagacagaggtt
acaaccgttatttgtggtaacaaagaactcaagaagctcatggacataagccaacagctt
gagactgtcaaacgcgttatttgcatggacgatgagttcccatctgaggcgagcagtact
tggacgacgacttcactcgctgatgttcagaagcttggccgtgaaagtcctgttgatcct
agcttcccgctttcagctgatgttgctgttataatgtacactagtggaagcactggtctc
cccaagggtgttatgatgacccatggtaatgtgctagctacagtttcagcagtgatgaca
attgttccagaccttggtaagagggatacgtacatggcatatttacctttggctcacatc
cttgagttagcagctgagagtgtgatggctactattgggagtgctattggatatggatct
cccttgacgctcactgatacttcaaacaagattaaaaagggcacaaagggagatgtcact
gctctaaagcctactataatgacagctgttccagccattcttgatcgtgtcagggatggt
gttcgcaaaaaggttgatgcaaagggaggagcggcaaagaaactgtttgactttgcatat
gcgaggagactatctgcaatcaatggaagttggtttggagcctggggattagaaaagctc
ctatgggatgtacttgtgtttggtaaaatccgtgcagtattgggaggtcagctccgttac
ttgctctctggtggagcacctctttctggtgacactcagagattcattaacatatgcgtt
ggggctccgatcggtcagggatatgggctaacagagacttgtgctggtggaaccttctcg
gagtttgatgacacatccgttggccgtgtgggtgctcctcttccttgctcctttgttaag
ctaatagactggccggaaggtggctacttgatcagtgataagccaatgcctcgtggtgaa
attgtaattggtggctctaatattacacttgggtatttcaagaatgaagagaagactaaa
gaagtttacaaggttgatgaaaaggggatgaggtggttctacacaggagacataggacag
tttcaccctgatggttgccttgagataatagacagaaagaaggatattgttaagcttcag
catggggaatatgtctccttgggcaaagtggaagctgctctcagtataagcccctacgtt
gaaaacataatggttcatgctgatccgttttacagttactgtgtggctcttgtggttgct
gcgcaacaaacacttgaaggttgggcatcaaagcaaggaatagagttcaccaacttcgaa
gagctgtgtgcgaaagaacaggccgtgaaagaagtgtatgcgtctcttgtcaaggcggct
aaacaatcacggttggagaagtttgagataccagcaaagatcaaagtgttggcggctcca
tggacgccagagtcagggttagtgacagcagcactaaagcttaaaagagatgtaattagg
aaggagttctctgaagatctcaccaagctatatgcttcctaa
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