Brassica napus (rape): 106353487
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Entry
106353487 CDS
T04128
Name
(RefSeq) putative DEAD-box ATP-dependent RNA helicase 29
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bna03009
]
106353487
Enzymes [BR:
bna01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106353487
Ribosome biogenesis [BR:
bna03009
]
Eukaryotic type
Pre-60S particles
Helicases
106353487
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
ERCC3_RAD25_C
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
106353487
NCBI-ProteinID:
XP_048591717
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All DBs
Position
A7:19764176..19768255
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AA seq
852 aa
AA seq
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MVEGKGFLVSSVTELHRKEKQKKKGKSGGFESLNLGPNVYNAIKKKGYKVPTPIQRKTMP
LILSGVDVVAMARTGSGKTAAFLIPMLEKLKQHVPQGGVRALILSPTRDLAEQTLKFAKE
LGKFTDLRVTLLVGGDSMQDQFEELTKSPDVIIATPGRLMHLLEEVDDMSLRTVEYVVFD
EADSLFGMGFAEQLHQILAKLGENRQTLLFSATLPSALAEFAKAGLREPQLVRLDVENKI
SPDLKLSFLTLRPEEKYAALIYLVREHISSNEQTIIFVSTKHHVEFVNSLFKLENIVPSV
CYGDMDQDARKIHVSRFRARKTMLLIVTDIAARGIDIPLLDNVINWDFPPRPKIFVHRVG
RAARAGRTGSAISFVTPEDIPYLLDLHLFLSKPIRPAPTEDEVLKNMEEVMNRTSEAIES
GVTVYGRFPQKTIDLIFNKIQEMIDSSAELDSLERTSRKAFRLYTTTKPAPSKESIRRAK
ALPREGLHPMFKSIIEGGELEAMAFFQKIKNFRPKQTILEAEGENAKARNVKGLQWVDVM
KRKREVHEEIINKRHEQSQKTSSNNHLEMEVDEPITTSIEDKIAGSKVSGKKRTAQQTFK
DEEFYISSIPVNHHSEAGLSVRGNEGFGSNRLDAAVLDLVADDGQGMKQQKTNYHWDKKS
KKFIKLNNGDRVTASGKIKTESGAKVRANKAGAIYKKWKDSTHKKAFSREDGDGDDTPSM
SGRGGRRGKRWSASVPNAHVRSEIKDLEQVRKERQEKANKMSYLHSKRGGGRGGARGGRG
GGRGSGRDFDGGSGRDFAGRSSRGGRGGGSSRGGRGGGFGGGRGGGSGGGRGGSSRGGKR
GGGGGGKRGRGR
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atggttgaaggaaagggtttcctggtgagctcggtcactgagcttcaccgcaaagagaag
cagaagaagaaaggcaaatccggaggattcgagtctctaaacctcggtcccaatgtctac
aacgcaatcaagaagaaagggtacaaagttcccacgccgatccagcggaagacgatgcct
ttgatcctctccggcgtcgacgtcgtcgccatggcgagaacgggttccggaaaaaccgca
gcttttctcatccctatgcttgagaagctcaaacagcatgttcctcagggtggtgttaga
gcgcttattttgtcgcctactcgtgacttggctgagcagactctcaagttcgctaaggag
ctcgggaagtttacagatctccgagttaccttactagtcggtggtgacagcatgcaagac
cagttcgaagagctaacaaagagccccgacgtgatcatcgcaaccccggggagactcatg
catctcctagaagaggtagacgacatgtcactaagaacagtcgagtacgtggtcttcgac
gaggcagacagtctcttcggcatgggtttcgccgagcagctccaccagatcctagccaag
ctaggcgaaaacagacagactctcctcttcagcgccaccttaccaagcgcgctcgcagag
ttcgcaaaggccggtctgcgcgagcctcagctagttcgtttagacgtggagaacaagata
agccccgacttgaagctctcgtttctaaccttaagacccgaagagaagtacgctgcgttg
atatacttggtgagagagcatataagctctaacgaacagacgatcatatttgtttcaaca
aagcaccacgtggagtttgtgaactcgctgtttaagctcgagaacatcgttccctctgtg
tgttacggtgatatggaccaagacgcgcggaagatccacgtgtcgaggttcagagcgagg
aagacaatgctgctgatcgtcactgatatcgctgctagaggtattgacataccgttgctt
gataatgttatcaactgggactttccaccgaggcctaagatcttcgtccatagagtgggg
agagccgctagagctggccgtaccggctctgcgatatccttcgtcacgcctgaggatata
ccgtatctgttggatcttcatctgttcctgtccaaacccatcaggcccgcgcctactgag
gacgaggtgttgaagaatatggaggaagtgatgaacagaactagtgaagctatagagagt
ggagtcactgtgtacggccgtttccctcagaagacgattgatcttatctttaacaagatc
caggagatgattgattcctctgcggagttggattctcttgagagaacatccagaaaggct
tttcgtttgtatacgacgacaaaaccagctccatcaaaagagtccattaggagagcaaag
gccttacctagagaagggttgcatccaatgtttaaaagtataattgaaggtggtgagtta
gaggcaatggcgttttttcagaagattaaaaacttcagacccaagcagaccatacttgaa
gcagaaggtgaaaatgccaaagctagaaatgtgaagggtttgcaatgggtggatgtgatg
aagaggaaaagggaagttcatgaggagatcattaataagagacatgagcagagtcagaag
acttcttccaataatcatttagaaatggaagttgatgaacctattaccacttctattgag
gacaagatagctggaagcaaagtaagcggtaagaaaagaacggcgcaacaaactttcaag
gatgaagagttctatatcagctccatacctgttaaccaccattcggaggcaggactatct
gtgaggggtaacgaagggtttggatcaaatagattggacgctgctgtgctagatctagtg
gcagatgatggccagggaatgaagcagcagaaaactaattatcactgggacaagaaaagt
aagaagttcatcaagttgaacaatggagatcgtgtaacagccagtggcaagataaagaca
gagagtggagccaaggtgagggcaaacaaagcaggtgcaatatacaagaaatggaaagat
agcacgcacaagaaagcgttcagccgagaggatggtgatggagacgacacaccaagcatg
tcaggtagaggtgggcgacgcgggaagagatggtcagcatcagtgcctaacgcacatgtg
cgttcagagatcaaagatctggagcaggtgcgcaaggagaggcaggagaaagctaacaaa
atgtcttatctgcatagcaagagaggtggtggcagaggaggggccaggggaggtcgtggt
ggaggaaggggaagcggtagggactttgatggtggaagcgggagggactttgccggtaga
agcagtagagggggaagaggtggcggaagcagtagaggaggaagaggtggtggatttggc
ggcggaagaggtggtgggtctggcggtggccgcggtggtagtagcagaggtggtaaaaga
ggaggtggtggtggagggaaacgtgggagagggagatag
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