Brassica napus (rape): 106353747
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Entry
106353747 CDS
T04128
Name
(RefSeq) cleavage stimulating factor 64
KO
K14407
cleavage stimulation factor subunit 2
Organism
bna
Brassica napus (rape)
Pathway
bna03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106353747
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106353747
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
106353747
U7-dependent histone pre-mRNA processing factors
106353747
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
CSTF2_hinge
CSTF_C
RRM_7
RRM_occluded
RRM_10
HTH_AT3G52170
Motif
Other DBs
NCBI-GeneID:
106353747
NCBI-ProteinID:
XP_013648991
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All DBs
Position
A7:complement(21013318..21016628)
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AA seq
460 aa
AA seq
DB search
MASSSQRRCVFVGNIPYDVTEEQLRDICGEVGPVVSFRLVTDRETGKPKGYGFCEYKDEE
TALSARRNLQSYEINGRQLRVDFAENDKGTDKTRDQGQGGPALPTATESQKQVGGSVDTN
MHQPVGLNLAISAASVMAGALGGPQVGTQSTLQAPASDPLTLHLAKMSRSQLSEIISSVK
LMATQNKEQARQLLVSRPQLLKAVFLAQIMLGIVSPQVLQTPNIVQAPNHMSGSSIQDTQ
LSGQVSTQNLLPPLAQRSQQLSRPTHSQFPIQQSSKQPFSQIPQLVAQPGPSSMNAQVQG
LSETAPFQRQKQLVPSSISMGYSVQTSVPNSAIQPSQVPRPQLTNSVMQQGGHMVSLNYG
KRINEGPHESINRPSKMMRVDERRTASFSEGHASNSMLPNPVQVQERAHQTQISPDVQAT
LLQQVMNLTPEQLRLLTPEQQQEVRKLQQALKQDNMTQHS
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggcttcatcttcccaacgacgctgcgttttcgttgggaacattccttacgacgttacc
gaggaacaactcagagacatttgtggagaggttggacccgttgtctcctttagattagtt
accgatagagaaacgggtaaacctaaaggctatggcttttgcgagtataaggacgaagag
accgcgttgagtgctcgtcgtaatcttcagagttatgagattaatggccgtcaattaaga
gttgatttcgctgagaatgacaaaggaaccgacaaaacccgagatcagggtcaaggaggt
cctgctttgcctactgctactgaatctcaaaagcaggttggagggtctgtagatacgaat
atgcatcagccggttggtctcaaccttgctatatcagctgcatctgttatggccggtgca
cttggtggtcctcaagttggtacacaaagtacactgcaggctccagctagtgatcccctg
actcttcatcttgctaagatgtctaggagtcagctctccgaaattatatcgtccgttaag
ttaatggctacgcagaacaaggaacaagctcgacagttgctggtttcgagacctcagttg
ctaaaagctgttttcctggcacagataatgcttgggattgtgagtccacaagtcttgcag
acgccaaatattgttcaggccccaaatcatatgtcagggtcgtccattcaggacacacaa
ctatctggtcaagtatctactcagaacctattaccgccactggcacaaaggtcacagcag
ctaagtcgacctacccacagtcagtttcccattcaacagtcttctaaacaaccatttagt
cagattccacaactagtagcccaaccaggcccttcttctatgaatgcccaagttcaaggt
ctgagtgaaaccgctccattccaacgccaaaaacaattggttccaagttccatcagcatg
ggttatagtgttcagacttcagttccgaatagtgctatccagccatctcaagtacctcgg
ccacaactaacaaactctgttatgcagcaaggtggacatatggtatcactaaactatggc
aaaagaataaacgagggacctcatgaatcaattaacagaccatcgaagatgatgagagtg
gatgaaaggagaactgcttcattcagtgaaggtcatgcgtctaactcaatgcttccaaat
cctgtacaagtacaagagagagcgcatcagacacagatctccccggatgtccaggcaacg
ttgctccagcaagtaatgaacctgacaccggaacagctgaggttgctgactccagagcaa
cagcaagaagtcagaaagctgcaacaagcgctcaagcaagacaacatgacgcagcattca
tag
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