Brassica napus (rape): 106354189
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Entry
106354189 CDS
T04128
Name
(RefSeq) receptor homology region, transmembrane domain- and RING domain-containing protein 2
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106354189
Enzymes [BR:
bna01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106354189
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106354189
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PA
zf-RING_2
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
Prok-RING_4
zf-RING_4
YitT_membrane
Motif
Other DBs
NCBI-GeneID:
106354189
NCBI-ProteinID:
XP_013649523
UniProt:
A0A816Z5S7
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All DBs
Position
A7:25091979..25094130
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AA seq
452 aa
AA seq
DB search
MKMMMNRALVLLLLLLFHLLTLSSLASAKVILIRNNITRSFDDIEANFAPSVKAAGEIGL
LYVAEPLDACSDLTNKPEQSSNGTSPFVLIVRGGCSFEDKVRKAQRAGFKAAIIHDNEDR
GILIAMAGNSGGIKIHAVFVTKETGDALKEFAGLSDTKVWLLPSFENSAWSIMAVSFISL
LAMSAVLATCFFVRRHRIRRRTSRSSRVREFHGMSRRLVKAMPSLIFSSVHEDNTTAFTC
AICLEDYSVGDKLRLLPCRHKFHAVCVDSWLTSWRTFCPVCKRDARTANGEPPASESTPL
LSSAASSFRSSSALSSFRSSAMLIGPSMGSLPTSISFSPAHASSSYIRQSFRSSSLRRSP
PISVSRSSMDLRQQGASPSPSQRSYMASPHSFNYPAMSPLNSRYMSPYRPSPSNASPGMI
GSSSNHPLNPLRYSESAGTFSPYASANSLPDC
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgatgatgaatcgtgctcttgtcctcctcctcctcctactcttccatctcctc
accctctcttctttagcctcagccaaagtgattctcatcaggaacaacatcactcgctcc
ttcgacgacatcgaagccaacttcgctccgtctgttaaagctgctggtgaaattggattg
ctttacgtggctgagcctcttgacgcttgctctgacttgacgaataagcctgagcagagc
tctaatggtacttccccttttgtgttgatcgttagaggaggttgtagtttcgaagataaa
gtcagaaaagcccaaagagctggtttcaaagctgctattatacatgacaacgaagaccgt
ggaatcttgatagcaatggcaggtaactctggaggtataaagattcatgcggttttcgtt
actaaagagacgggagatgctttaaaggagttcgccggtttgtctgataccaaagtatgg
ctgcttcctagcttcgagaactctgcttggtccatcatggcggtttcgttcatctccttg
ctcgcaatgtcagctgttctcgccacttgtttcttcgtccgtaggcataggataagaagg
cgaacgtcacggtcctctagagtcagagagtttcacggtatgagtcgccggttggtgaag
gcaatgccgagtctaatcttcagctctgtgcacgaagacaacactactgccttcacttgc
gctatctgtttagaagactacagcgttggagacaagctaaggctcttgccttgccgtcac
aagtttcacgcggtgtgtgttgactcgtggctaacctcatggagaacgttctgccccgtg
tgcaaacgcgacgcgagaacagccaacggggagccgccagcttcggagagcacgccgttg
ctctcgtccgccgcgtcgtcttttcgatcttcctctgcgctctcttcgttcagatcatca
gcaatgctgatcggtccttccatgggatctttaccgacttcgatctcgttctctcctgcg
catgcgagctcttcctacatcagacagtccttcaggtcttcctctctcagacgctctcct
ccaataagcgtgagtcgaagctcaatggatctaaggcaacaaggagcttctccgtcgccg
tcgcagagatcatatatggcttctccgcattcgtttaattaccctgctatgtcgcctctc
aactctaggtacatgtcgccttataggcctagtccgagcaatgcgtcgcctggaatgatc
gggtcgtcatcgaatcatccgttaaatcctctgcgttatagtgaatcagcagggactttc
tctccttacgcttctgcaaactctctgccagactgttga
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