Brassica napus (rape): 106354197
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Entry
106354197 CDS
T04128
Name
(RefSeq) E3 ubiquitin-protein ligase RNF170
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106354197
Enzymes [BR:
bna01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106354197
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106354197
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1232
RING_XB3-XBAT31
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4_4
zf-RING_2
zf-C3HC4
zf-RING_5
zf-C3HC4_2
zf-RING_13
Motif
Other DBs
NCBI-GeneID:
106354197
NCBI-ProteinID:
XP_013649531
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All DBs
Position
A7:25146363..25148065
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AA seq
191 aa
AA seq
DB search
MNGPPENDLCSICHSHFTAPCQANCSHWFCGNCIMLVWRHGSTLQPCKCPLCRRPISLLV
PTEDTIRNRSDSAVSEVLANLETYNRYFGGRSTSLFQRMQDLPFLLRRLLREMMDPQRTL
PLVIRVRVYIAMILSVVYIVSPIDIIPEGVLGVVGLLDDLLIALICFLHVAALYRSVLYF
RHAGSLTNKCF
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgaatgggccgccggagaacgatctttgctcgatatgtcattcccacttcactgctcct
tgccaagccaattgctctcattggttctgcggaaattgcataatgcttgtgtggaggcat
ggatctacactacagccatgcaaatgccccttgtgtcgtcgtcccataagtttgctcgtt
cctacagaagacactatcagaaaccgtagtgactctgcagtttctgaggttcttgctaat
cttgaaacctacaaccgatactttggtggacgatcaactagtttatttcagaggatgcaa
gaccttccctttttacttcggagattgttgcgggaaatgatggatcctcaaagaacactt
ccacttgtcatcagagttcgagtttatattgcaatgattctcagtgttgtttacatagtc
agtccaatagatatcattccagaaggagttcttggggtagtcggcttgcttgatgatcta
ctcatagcattgatttgcttcctccatgttgctgctttgtaccgttcggttctctatttc
cgtcatgccggttcgttaaccaataaatgtttttga
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