Brassica napus (rape): 106354259
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Entry
106354259 CDS
T04128
Name
(RefSeq) uncharacterized protein LOC106354259
KO
K14315
nucleoporin NDC1
Organism
bna
Brassica napus (rape)
Pathway
bna03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106354259
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106354259
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106354259
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
106354259
NCBI-ProteinID:
XP_013649609
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All DBs
Position
A7:complement(25521280..25523729)
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AA seq
507 aa
AA seq
DB search
MPSPPAPEAVVSHRFAAFLIWQSIPSTAIFLFFNLFLFSATSLASFLLTFLVFHASNLIF
SISLALLSSLTSDSPLSPLQFALGLLRRLSDPDFRRRARVSLRIALFVSATGFAGFCSAA
VFCLETGEVGRVGFRGFVTGLLYAVLFVVKQRWLLEFPIIQRPPFYSFKIGLPSALTQAL
KLSGVLYVLSTVMLLFLLDWSGGLVSVSRFLGEQVISYAGSFCLILSWEVTHHIHQVLHT
KRFGFAPPKGSAAAETNPSEPLLAALEGSPPGSLEQYLAYLDLYMVSQNNVDTWRRAAFF
AESSETYKRVITLCLKPLEELASKLAAGIDHTFAEIGESYIDPKFGESLKSFQLYAWCAQ
TAASLTSISHKEDSLGVAQLSGANAAVVSTLLSLLLAVETFMGKKNNLQSPQQLLGPASI
KWATSSMVRKDVKPIKKRSGALYAHAYAASDVLRVSMYQIVSTFRDEMVSSDRTEILGRD
WIGSKKPVFGTSEMLLQKLKLFLEFQA
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgccttctcctccggcgccagaggcggtagtcagccaccgcttcgccgccttcctcatc
tggcaatcgatcccatcaacagccatcttcctcttcttcaacctcttcctcttctccgcc
acttccctcgcctccttcctcctcaccttcctcgtcttccacgcctcaaacctcatcttc
tccatctccctcgcgctcctctcctccctgacttccgattcccctctctcccctctccaa
ttcgccctcggcctcctccgccgcctctccgatccggacttccgccgccgcgctcgcgtc
tctttacgaatcgcgctcttcgtctccgccacggggttcgccgggttctgctccgccgcc
gtgttctgcttggagactggagaggttgggagagtagggtttagagggtttgtcactggc
ttgctctacgcggtcctcttcgtggttaagcagcgatggctgttagagttcccaatcatt
cagcgtccaccgttctacagcttcaagattggtctcccttcggcgttaacgcaagctttg
aagctgtcgggtgtgctttatgtactgtcgacggtaatgctgttgtttctgctagactgg
tctggtgggcttgtgtcggtttcgaggttcttgggtgagcaggttatttcttatgctggg
agtttctgtttgatcctctcttgggaagtgactcaccatattcatcaggttctgcacaca
aaacgctttggttttgctcctccaaaaggatctgcagcagcagaaacaaatccaagcgag
cctcttctcgctgctttagaagggagtcctccaggttcgctcgagcagtatctcgcgtac
cttgacctctacatggtgtctcagaacaatgtcgacacctggcgtcgcgctgctttcttc
gcggagtccagcgagacttacaaaagagtcatcactctatgcttgaagcctttagaagag
cttgcctccaagttagctgctgggatagaccacacctttgctgaaataggtgaatcatac
atcgatcctaaatttggcgaatcactcaagtcattccagctatatgcttggtgtgctcaa
acagccgcatccctcacttcaatctcacacaaggaagacagtctcggagtagcacagctc
tccggagcaaacgccgccgtcgtctcaacgctcctctctcttttgctagctgttgagacg
tttatggggaagaagaacaatctgcaatcaccgcagcagctcttgggacccgctagcatc
aaatgggcgacctctagcatggtgagaaaagatgttaagccgatcaagaagagaagtggg
gcgctgtacgctcacgcgtacgcagcttcagatgttttgagggtatcgatgtaccagatt
gtttccacgttccgcgatgagatggtcagcagcgacagaaccgagattcttggtagagat
tggatcggaagcaagaaaccggtttttggaacgagcgagatgttgttgcagaagcttaag
ctcttcctagagttccaagcttaa
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