Brassica napus (rape): 106354465
Help
Entry
106354465 CDS
T04128
Name
(RefSeq) chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic-like
KO
K27707
chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bna03041
]
106354465
Spliceosome [BR:
bna03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
106354465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRS1_YhbY
Motif
Other DBs
NCBI-GeneID:
106354465
NCBI-ProteinID:
XP_013649851
LinkDB
All DBs
Position
A2:1844752..1847693
Genome browser
AA seq
683 aa
AA seq
DB search
MLTPLFVSVRPLPSLTTISSLNPNQNPPHTSKAPNFNQFNENPKLPDNAIKVPTAPWMKG
PIFLPPDELINTSHHHKSTRKQNAEEKTFKALNRRESGVRGSKAMKKIVRSVEKLDDSEG
EFKSLEEAETRRRRRMPWEREEEKFILRRRKKERVLTTADLILDEGLLKRLRLEASKMRE
WVNVRKAGVTETVVNDIRLIWEENELAMVRFDVPLCRNMERAQEILELKTGGLVVLSKKE
FLVVYRGPLSDSSVCVKEGGDDISSSLYEREGERLLNGLGPRYVDWWMRRPFPVDADLLP
EVVDGYRTPSRRCPPNTRAKLSDKELTYLRNIAQALPFHFVLGRNHGLQGLASAILKLWE
KCVIAKIAIKWGALNTNNEEMADELKNLTGGVLILRNKYLIILFRGKDFLSDEVADLVDD
RERLLRRYQHFEETRRESDIEISEVVADGEQLEETSKTGTLLEFQELQRKFGDMEVRNLE
TEAEKAKLEKELKSQEHKLCILKSKIEKTTIELLKLNSLRKPSERDDDIEILTNEERECL
RRIGLKMNSSLVLGRRGVFDGVMEGLHQHWKHREVAKVITMQKLFSRVVYTAKSLEAESN
GVLISIEKLKEGHAILMYRGRNYKRPSSKLMAQNLLTKRKALQRSVLMQRLGSLKFFAYQ
RERAIEDLKLSLVKLQGSASELC
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgctaactcctctcttcgtctcggtgcgaccattgccatcacttaccaccatctcctcc
ttaaacccaaaccagaaccctccacacacctccaaagctccaaactttaatcaattcaat
gaaaacccaaaactccccgacaatgcgattaaggtcccgacagctccatggatgaaaggt
cccatctttctcccacccgacgagcttatcaacacttcacatcaccacaagagcaccagg
aaacagaacgccgaggagaagacgttcaaggcgttaaaccgtcgagagagcggcgtgaga
ggaagcaaagccatgaagaagatcgtccgcagcgttgagaagctcgacgattctgaaggc
gagtttaagtccttagaggaagctgagacgaggaggaggaggagaatgccttgggagagg
gaggaagagaagttcatattgaggaggaggaagaaagagagagtcttgacgacggctgat
cttatcttagacgaagggttgttgaaaagactgagacttgaagcttcgaagatgagagaa
tgggtgaatgtgagaaaagcaggagttacggaaacagttgtgaacgatattagattaatc
tgggaggagaacgagcttgctatggtgaggtttgatgtccctctttgtcggaacatggag
cgagctcaagagatcttagagttgaagactggagggttggttgtgttgagcaagaaggag
tttctcgttgtttaccgaggaccattgagtgattcatcagtatgtgtgaaggagggggga
gatgatattagctcatcgttgtacgagagagaaggtgagaggctactgaatggtttgggg
cctagatatgtggattggtggatgagaagaccgtttcctgttgacgctgacttgcttcct
gaagtggttgatggatatagaactccttctagacgttgcccacctaacactagagcaaag
cttagcgacaaggagcttacttacttgagaaacattgctcaggctttaccgtttcatttc
gtccttgggaggaaccatgggcttcaaggtttagcttctgctatcttgaaactatgggag
aagtgtgttattgcaaagattgcaatcaagtggggagctctcaacacaaacaatgaggaa
atggcagatgagttgaagaatctcactggaggagttttgatactacgaaacaaatacttg
ataatactattcagaggcaaggactttctatctgatgaagttgcggatttggttgatgac
agagagaggttactcagaagataccaacattttgaagagaccagacgtgagagtgatata
gagatctctgaggtggtagcagatggtgaacagttggaggaaacaagcaagaccggaacc
ttattagagtttcaagaacttcagagaaagttcggtgatatggaggtgagaaacttggag
actgaagctgagaaagcaaaactagaaaaggaacttaaaagccaagaacacaagctttgc
attctgaaatcaaagatagagaagacaacaatagagttactcaaattgaattctttacgg
aaaccatctgagcgcgacgatgacattgagatactgactaatgaagaaagagaatgcttg
agaagaatcggactgaagatgaacagcagcttggttcttggaagaagaggagtctttgat
ggcgtaatggaaggtcttcatcagcactggaagcacagagaagttgcgaaagtgatcacg
atgcagaagcttttctcgagagttgtttacacagcgaaatcacttgaagcagaaagcaat
ggagtactaatctctatcgaaaaacttaaagaaggacatgcaatactcatgtatcgtggc
aggaactacaaacgtccttcgtcgaaactgatggcacagaatcttttgactaaaagaaaa
gcgttgcaaagatctgtcttgatgcagagacttggctcactgaagttctttgcttaccag
agagaaagagccattgaagatttgaagttgagtttggtaaaacttcaaggctctgcttct
gagctatgttga
DBGET
integrated database retrieval system
