Brassica napus (rape): 106354554
Help
Entry
106354554 CDS
T04128
Name
(RefSeq) solanesyl diphosphate synthase 1, chloroplastic isoform X1
KO
K05356
all-trans-nonaprenyl-diphosphate synthase [EC:
2.5.1.84
2.5.1.85
]
Organism
bna
Brassica napus (rape)
Pathway
bna00900
Terpenoid backbone biosynthesis
bna01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
106354554
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
bna01006
]
106354554
Enzymes [BR:
bna01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.84 all-trans-nonaprenyl diphosphate synthase [geranyl-diphosphate specific]
106354554
2.5.1.85 all-trans-nonaprenyl diphosphate synthase [geranylgeranyl-diphosphate specific]
106354554
Prenyltransferases [BR:
bna01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
106354554
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
HEPPP_synt_1
Motif
Other DBs
NCBI-GeneID:
106354554
NCBI-ProteinID:
XP_013649975
LinkDB
All DBs
Position
C6:complement(47246288..47248869)
Genome browser
AA seq
417 aa
AA seq
DB search
MMTSCRNIDLGTSVLDLISCGCGRRQFPKTVCKIGMTRSYGGGGNLLFIRRDVGRSCKAV
PTKPKEISLVNGIGEAKTVSFDLRQESSSKQPISLVNLFEVVADDLQTLNDNLLSIVGAE
NPVLISAAEQIFGAGGKRMRPGLVFLVSRATAELAGLKELTTEHRRLGEIIEMIHTASLI
HDDVLDESDMRRGKETVHELFGTRVAVLAGDFMFAQASWYLANLENLEVIKLISQVIKDF
ASGEIKQASSLFDCDVTLEDYLLKSYYKTASLVAASTKGAAIFSRVDTDVTEQMYEFGKN
LGLSFQVVDDILDFTQSSEQLGKPAGSDLAKGNLTAPVIFALEKEPRLREIIESEFCEEG
SLEEGIELVREGGGIRRAQELAREKADDALKNLQCLPQSGFRLALEEMVMFNLERID
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgatgacatcgtgtcggaatatagacttgggtacgagtgtgcttgatctgatctcatgt
ggctgtggtcgtcgtcagtttcccaaaactgtttgcaagattggtatgacgagaagctat
ggcggcggcgggaatctgctgtttatccggcgtgacgtggggaggagctgcaaagctgtg
ccgacaaaacccaaagagatttctttggtcaacggaataggtgaagccaaaacggtgagt
tttgatttgagacaagagtcgtcatcaaagcagcctatttcattggtgaatctgtttgag
gttgtagctgatgatcttcagacgttgaatgataatcttttatcgattgttggtgcagag
aatccggttttgatatctgcagctgagcaaatctttggagctggtggtaaaagaatgaga
ccgggcttggtgttcctcgtatcacgagccacagcagagttagctggcctaaaggaactt
acaacggaacatcggcgtttaggtgagatcattgagatgattcacactgcaagcttgata
catgatgatgtgttagatgagagtgatatgcgcagaggaaaggaaacagttcacgagctt
tttggcacgagagtagctgtactagctggtgatttcatgtttgctcaagcatcatggtac
ttagccaacctcgagaacctggaagtcatcaagctcataagtcaggtgatcaaagacttt
gcgagcggagagataaagcaagcatcgagtctgttcgactgtgacgttactctagaagac
tacttgctcaagagttactataagacagcctcgttggtcgccgcaagcaccaaaggagct
gccatcttcagcagagtcgataccgatgtcacagagcagatgtacgagtttgggaagaat
cttggcctctctttccaagtggtcgacgacattttggacttcactcagtcgtcagagcag
ctagggaagccagcagggagtgatttggctaaaggtaacttaaccgcgcctgtgattttc
gctctggagaaggagccgaggctgagagagatcatagagtctgagttttgcgaggagggt
tctctggaagaagggattgagttggtgagagaaggtggaggaatcagaagagcacaagag
ttggctagagagaaagctgatgatgctttgaagaatctgcagtgtttacctcagagtggc
ttcaggttggctctagaagaaatggtaatgtttaatctcgaaaggatcgattag
DBGET
integrated database retrieval system
