Brassica napus (rape): 106354613
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Entry
106354613 CDS
T04128
Name
(RefSeq) DNA topoisomerase 2-binding protein 1-A isoform X1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
bna
Brassica napus (rape)
Pathway
bna03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
106354613
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bna03032
]
106354613
03400 DNA repair and recombination proteins [BR:
bna03400
]
106354613
DNA replication proteins [BR:
bna03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
106354613
DNA repair and recombination proteins [BR:
bna03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
106354613
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PTCB-BRCT
BRCT
BRCT_2
LIG3_BRCT
ECT2_BRCT0
TopBP1_BRCT0
Motif
Other DBs
NCBI-GeneID:
106354613
NCBI-ProteinID:
XP_048592290
LinkDB
All DBs
Position
A7:27144078..27150189
Genome browser
AA seq
1016 aa
AA seq
DB search
MKTATQLFKGANVFMSRNLVPPEVFDTLLDTFKLNGAEIFLCCDPSRNGPSDFHVIASPQ
HEKFEDLKAKGCNLIGPQCALSCAKEGRPLPQGGFTCCLAMDGLKVLASGFLIDEKVKIE
KLVTSMGGVLVSRTSSDVNFVIVKNVLAAKYKWALYVQKKPVVALSWLHQCWNEHRVVPQ
EPYKIPPFSGLRICVTKIPADHRKGMEKLISENGGRYSGELTKACTHLIADAAEGDKYKV
ARKWGHIQIVTRKWFEQSIARKVCLNEELYPVLGSISSSRGVRGLGNHDNQEKFPECPVS
LSHSTAVAEDSCASYAQSRESDIEPCASQNRLSTSMNPSSHVKEPSKDPTTEPQEQNIDG
CTAKDSVTEDNDLYLSDCKIFLLGFEASEMRRLVKLVRRGGGSRYMMLSERMTHIVVGTP
SERILIYSEKKEARSVAASGVVHVVTPNWLEDCDREKKEIPVHKVYTAHNLILPRDSECL
SKGSRAGMPGMEKGKTFPQTMAYDSPSRSISISDEAATLRGKNKEAVLDVGRKDEIHVER
KIVSPKKKETLSSVTTIKSNEQKIQCESSGQSKQERKSSVFKGKIFCFSDSFPQNTRPEI
VEWVNQGGGEVVNDSFMKNTDFTIECHGMFRSAAGTTQTTYVSSHWVRSCLEDGCLFDIS
SHILYSPLPCQTPLPGFESLRFCVSHYEEKERLLLKNLCFVLGAKFVIRQTKKVTHLLCK
FAHGPKYDAASKWGIVPVTSDWVYECVKQNQVVCPDNYHPKEMSTQDREAGIGLASQFHT
QSVPVASRETESLLGSHSEDRVKSQSFAGKNGCGKSEVNNRLGETGREQSFPSKKAKLLR
DGQENDAFPMDESSSNFARPLKSGDGIGFGNNVASGRVVPDVADTIEDLLEQTSKIQDQN
SPGSGRISEKNVSLFVCSLNLLIFGIVRLLNDMIQQLFSASEQYNSGNHSVTGLSRHWIN
RVQENDDAGNPRGDVTPGTYGNFSETQTESQVVGYEEDLSGRQMLIDRVRTRSSLT
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atgaagacggcgacgcaactgttcaaaggggcaaacgtgttcatgtctcggaacctggtg
ccacctgaagtcttcgacacacttctcgacaccttcaagcttaacggcgccgaaatcttc
ctctgctgcgatccctcccgcaacggcccctccgacttccacgtcatcgcttctccccag
cacgagaagttcgaggatcttaaagctaagggttgtaacttgataggtccgcaatgtgct
ctctcctgcgcgaaagagggtagacccctgccacaagggggattcacttgttgtttagcc
atggatggtcttaaggttcttgcttctggttttctgatagatgaaaaggtcaagatcgag
aagctagttacttccatggggggagttttggtttccagaacttcttcagatgtcaacttc
gtcattgtgaagaatgtcttggctgctaagtacaagtgggccctgtatgttcagaagaaa
ccagttgttgcactgagttggttacatcagtgttggaatgagcaccgtgtggttccgcag
gaaccatataagattcctcctttttctggattgaggatctgtgtcacaaaaattccagca
gaccaccgtaagggaatggagaagcttatttcagaaaatggagggaggtactctggggag
ctaacaaaggcgtgtacacatctgatcgctgatgctgctgaaggtgacaaatacaaagtt
gctcggaaatggggtcacattcaaattgttacgcggaaatggtttgagcagtccattgct
agaaaagtttgtctcaatgaagagctgtatcctgttctgggttccatatcctcgagtaga
ggggtgagaggcttaggaaaccatgataatcaagaaaaatttcctgaatgtccagtgtca
ctgtcgcattcgactgcggtcgcggaagactcatgtgcttcttatgctcagtctagagag
tcagatatagaaccatgtgcctcacaaaatcgtctttccacatctatgaatcccagtagc
catgttaaagaaccaagtaaagacccaactacagagccgcaagagcaaaatattgatggt
tgtaccgccaaggattcagtaactgaagacaatgacctgtacttgtcagattgtaaaatt
ttcttgcttggttttgaagcttctgaaatgcgtaggcttgttaagttggtccgaagaggt
ggtggatcacggtatatgatgcttagcgaaagaatgacgcatattgttgttggaactcct
tctgagagaatactcatttacagtgagaaaaaggaggctagaagtgttgcagcttctggt
gtcgttcatgtagttacacccaattggcttgaagattgtgatcgtgagaaaaaagaaatt
cccgttcataaagtatatactgctcacaaccttattcttccaagagattctgaatgcttg
tcgaaaggatctcgtgcaggaatgccgggtatggaaaagggtaaaacttttcctcagacc
atggcatatgattccccttcaaggagtatcagtatctcagatgaagcagcaactttgcgg
ggaaagaataaagaagcagtgctggacgttggcaggaaagatgagattcacgtggaaaga
aaaatagtatcacccaagaaaaaagaaacacttagttccgttacaactattaaaagcaac
gaacagaaaattcaatgtgaatccagtggtcagagcaagcaagaaagaaagtcatcagta
tttaaggggaagatattttgtttctcagattcgtttcctcaaaatacgcgacccgaaatc
gtggaatgggtgaatcaaggagggggagaggtggtaaatgattcttttatgaagaacaca
gattttactattgaatgccatggtatgttcaggagtgctgctgggactacccaaactact
tatgtctcgagtcactgggttcgatcttgtttagaggatggttgtttatttgatattagt
agccatatcctctattcgcctcttccctgccagactcctttgcctggatttgaaagcctt
cgcttttgtgtatcccattatgaagagaaggaaagattactccttaagaatttatgtttt
gttcttggagcaaaatttgtgataagacaaaccaagaaagtgactcacttgctatgcaaa
tttgctcacggacctaagtatgacgcagcttccaagtggggaatagttcccgtgacatct
gactgggtgtatgaatgtgttaaacagaatcaagttgtttgtccagataactatcatcca
aaggaaatgagcactcaagaccgggaagcagggatcggcttggcaagtcaatttcataca
cagtctgtgccagtggcgtcaagggagactgagtctctgcttggaagccactctgaagat
agggtaaaatctcaaagttttgctgggaaaaatggctgcggtaaaagtgaggtaaacaac
agacttggagaaactggaagggaacagagttttccgtctaagaaggcaaaacttttgcga
gatggtcaagaaaatgatgcgtttcctatggatgaaagttcaagtaactttgctcgccct
ttaaaatctggagatggcattggttttggaaataacgtagcaagtggtcgtgtagttcca
gatgtggctgatactattgaggatctgttggagcagacaagtaaaattcaagatcagaac
tctcctgggagtggaaggatttcagagaaaaatgtatccttatttgtgtgctcattgaat
ttattaatatttggaatagttcgactccttaatgatatgatacaacagcttttttcagct
agtgaacaatacaacagcgggaatcattctgtgactggcctgtctagacactggataaac
agggtccaggagaatgacgatgcaggcaatcctcgaggagatgtaactccaggcacttac
ggaaactttagtgagacgcagacagagtctcaggttgttggttacgaggaagatctttca
ggaaggcagatgcttatcgatagagttagaacacgaagcagcttaacataa
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