Brassica napus (rape): 106354617
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Entry
106354617 CDS
T04128
Name
(RefSeq) LOW QUALITY PROTEIN: histone-lysine N-methyltransferase ASHH2
Organism
bna
Brassica napus (rape)
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SET
AWS
zf-CW
Motif
Other DBs
NCBI-GeneID:
106354617
NCBI-ProteinID:
XP_048592289
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Position
A7:complement(27129540..27137465)
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AA seq
1705 aa
AA seq
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MDCKENGVSDPSGDENLTSAAMDINGSLSEKAGEDIESITSLETPQAASVTNPAMEEDQR
ECFLEAEQMGEGKLEENTDAVCCVADESQKPGVVSDEAAEQGQGSVSDATVLGGGTVLPI
GVSEAGTESVFLNDAPEKVESLESEKDIENDEAGSDGEGKEGNNEPSSDDVSLIRSCPFP
DSALDSGGLGCSETENDVKSSSDTDGNIPLVVSPSLAITEMLSNSDGGLRSCDLDYIVDK
ETIDPDLRLVHEDELHTDLSEKNETLLKNHVGNSSSESDVAGMNDDVAADPRAQSFSRTS
LIEENTSGVEANAPITDPSLVRSFPLKFGNGGIGARNPENAVESIRIVDGNGRIGGEVAS
ASGTSESSPRRRSRVGKQGNLSQTNLGAPLPRKSSRKKQSERNLDSIFNCSKQKRSSVSK
PDRSSQWGLPCRTAEIFLQSNNIPYGRPPHHETKQPQNSPKNGEHNTQASSGSCLRLKVK
FGKSGGQKPLNITVSKVSGNSLPAGGFVKAGKGLEFPGPADIVEDKLQIVETREQLKEKN
NSLEKLSCRLLSDSITDEKKNQDAGGLCRKLGGDVLDEGTHLSSSMVVEEGERANGTRPL
DSETSPDSEVINSVQKDLPHGFSSTAEDLVNTSRGLEKQDELLASVSPLENGSHLIPNAK
KSKNPKPKGNGTRKGKSKSKSAKGGRKNESQAALEQHSFINRSAGSDDSKDHEVGRVVSN
ETTGALLDANIGKPSAVNGAIWQDGIHGEAVMDLTIEDSSPTESAWVRCDDCFKWRRIPA
SVVESIDESSRWICMNNSDKDFAHCSISQEMSNEEINDQLGIGQDEADAYDYEAAKRGKD
KEQKSKRLPVNKKACFRAIKTNQFLHRNRKNQTIDEIMVCHCKPPPDGRLGCGEECLNRM
LNIECLHGTCPAGDLCSNQQFQKRKYVKFERFQSGKKGYGLRLLEDVREGQFLIEYVGEV
LDMQSYESRQKDYASMGQKHFYFMTLNGNEVIDAGAKGNLGRFINHSCEPNCRTEKWMVN
GEICVGIFSMKDLKKGQELTFDYNYVRVFGAAAKKCYCGSSHCRGYIGGDPLNGDVVVQS
DSDEEYPELVILDDDESGEGILDATSKIFMDGADMQMPQNSTKVDDSKDLASQSPSLVSV
KLPESEVLPSFQPTEASKELSTDMPVIDVQQEVLEKKTKGASPASKSISRLSSDGANADK
TVKHGSGEDVKILSRPRPRTKTSRSSGSSKQALPGVNKAQTTPVKKLQQQPIKSKGSEEV
SPSGRIETFEGKLNELLDAGGGISKRRDSAKGYLKLLLLTAASRGNANEGIQSNRDLSMI
LDALLKTKSRTVLVDVINKNGLQMLHNIMKQYRRDFKKTPILRKLLKVLEYLATRDILAL
EHIVRPPPYAGMESFKQSILTLTEHDDKQVHQIARNFRDRFIPKHLRKPWRIDREERSES
RRSPINSRFRSSQEPRYDHHSPRRAEPFSSRAATPETPSVSDGCIQPTSSSLPETNGRKR
KSRWDQPSTSKEQRTMTDVQDDLPPGFSSPCTDAPNAVTAQPQAKFLSRLTVSYGIPLSI
VHQCGSPCKDDPNSWSVAPGVPFAPFPPLPPVTHGEFFANKGNGTVSASPKRKREFSSDI
GTSYFRQQKQNVPPWIRYNGWEKTANSSIPRHLTVEKKINNQENLEFRERSTHSMKVKTM
QLLMRITVKSSSGESCAFLPPFGIF
NT seq
5118 nt
NT seq
+upstream
nt +downstream
nt
atggattgcaaggagaacggtgttagtgacccttccggggatgaaaatcttacctctgct
gcgatggacatcaatggaagtttatctgagaaggctggagaagatatagagtcaatcact
agtttggagactccacaggctgcatcagttacaaaccctgcgatggaggaggaccagagg
gagtgctttctagaggctgagcaaatgggggagggaaaacttgaggaaaacactgatgct
gtttgttgcgttgctgatgaaagtcagaaacctggagtggtttcggatgaagctgctgag
caaggtcaaggatcggtttctgatgccactgtgcttggtggtggcacagtattgcccata
ggggtcagtgaagcaggtactgaatcggtttttctaaatgatgcacctgaaaaggttgag
tctttggaaagtgaaaaagatatagagaatgatgaagctggaagtgatggtgaaggcaag
gaaggaaataacgaaccatcgagtgatgatgtttctctcattcggagttgtccctttcca
gattcagcattggattctgggggtttgggttgcagtgagacagagaatgatgtgaagtct
tcaagtgatactgatggcaatatccctctcgtggtatctccttcgttagctatcacggaa
atgttaagtaatagtgatggtggtctgcgttcatgtgatcttgattacatcgtagacaaa
gagacgatcgatccagatttgaggttggtacatgaggatgagctgcatactgatctttct
gagaagaatgaaacactgctaaagaaccatgtggggaattcatcaagtgaaagtgatgtg
gctggtatgaatgatgatgtggctgctgatccgagagcgcaaagtttcagtcggacgtca
ctcatagaggaaaatacctccggtgtagaagccaacgcccctattaccgacccttctttg
gtgaggagttttccgttgaagtttggtaatggaggcattggtgctcgtaatcctgaaaac
gcagtggagtcgatcaggatagtagatggcaatggcagaataggtggcgaagttgcttct
gcatctgggactagcgagtcttcacctcgaaggaggtcccgagtcggtaaacagggtaat
ctgtcgcagaccaatctgggtgctcctcttccgagaaaatcctctagaaagaaacaatca
gaaagaaatttggactcaatttttaactgttcgaagcagaagaggagctctgtttcaaaa
ccagaccgttcttctcagtggggattgccatgtaggaccgctgaaatcttcttacagagc
aataatattccttatggtagacctccgcatcacgaaacaaagcaacctcagaacagtcct
aaaaatggagagcataatacccaagcatcaagtggctcttgccttcgtttgaaagttaaa
tttggtaagtcaggtggccaaaaacctttgaacattacagtctctaaggtcagtggcaac
tctttgcctgctggtggttttgttaaggccggaaagggtttagagtttccagggcctgca
gatattgtcgaggataaactccagattgtggaaactagagagcagttaaaagagaaaaac
aattccttggagaaactttcatgtaggctgttatctgattctattacggatgagaaaaag
aaccaagacgctggggggttatgtaggaagctaggtggtgatgttttagatgagggtaca
cacctttcctctagtatggtggttgaagagggcgagagggccaatggaacccggcccctg
gactctgaaacttcaccagattcagaagttatcaactctgtgcaaaaggatttgcctcat
ggtttttccagcactgccgaagacctggtcaacacgagcagaggattagaaaaacaggat
gaattgcttgcttcagtatctcctttggaaaatggttcacatctaattcccaacgccaaa
aaaagtaaaaatcctaagccaaaaggtaatggaacaagaaaagggaaatccaagtccaag
tctgccaaaggcgggagaaaaaatgaatctcaagcggcgttagagcaacacagctttata
aataggagtgctggaagtgatgatagtaaagatcatgaagtaggaagagtggtttctaat
gaaacaacaggtgctcttttggacgctaatattggaaaacccagtgccgttaatggcgcc
atatggcaagatggtattcatggggaagcggtcatggaccttactattgaggatagctct
cccacagagagtgcttgggttcgatgcgatgattgttttaaatggcgacgaatacctgct
tctgtggtagagtcaattgacgagagctcgagatggatctgtatgaacaactcagataaa
gattttgctcattgctcaatctctcaagagatgtcaaatgaagaaattaatgaccagttg
ggcataggacaggatgaagcagatgcatatgactatgaggcggctaaaagggggaaagac
aaggaacagaagagcaaacgtttgccagttaacaaaaaggcgtgcttcagggccataaaa
acaaaccagtttcttcatcgtaaccgtaaaaatcaaacaatagacgagataatggtttgt
cactgcaaaccaccacctgatggtagactgggttgtggagaagaatgtctgaatagaatg
cttaacattgaatgtctccatggtacatgccctgctggcgatctatgctcaaatcagcag
tttcaaaaacggaagtacgttaagtttgagagattccaatcgggtaagaagggttatggc
ctgagattgcttgaggatgtacgtgagggacaattccttattgaatacgttggagaggtg
cttgatatgcaatcttatgagtctcgtcagaaggattatgcttccatgggtcagaaacat
ttctatttcatgacactgaatgggaatgaggtaattgatgctggtgcaaagggaaattta
gggcgtttcattaaccatagttgtgaaccaaactgccgtacggaaaagtggatggtgaat
ggtgaaatttgcgttggaatattctccatgaaagaccttaagaagggtcaggagttgaca
tttgactacaactatgtgagggtttttggtgccgctgccaaaaagtgttactgtggatca
tcacattgccgaggttacattgggggagatcctttgaacggtgatgtagttgttcaaagt
gattcagatgaagagtatcccgaacttgtgatccttgatgatgacgaaagtggggaagga
atcttagatgcaacgtctaagatcttcatggatggtgctgacatgcaaatgccgcagaac
tctacaaaggttgatgattccaaggaccttgcttcccaatcgcctagcttggtatctgta
aaacttccagagagcgaggttcttccatcttttcaaccgaccgaagcatccaaggaactt
tcgacagacatgcctgtcattgatgtccagcaggaggttcttgaaaagaagactaaaggc
gcatctcccgcgtccaagtctatcagcagactgtcctcggatggtgcaaatgctgataaa
acagtaaagcatggatctggtgaagatgtaaagatactttcacgaccccgccctcgtact
aaaacttcgcgttcatcagggtccagcaagcaagctcttcctggtgttaacaaagcacag
actacaccagtcaaaaagttgcaacagcagcccatcaaatctaaaggatcagaggaagtt
tctcccagcgggcgtattgaaacatttgaagggaaactgaacgagttactagatgctggg
ggagggattagcaagcggagggattcagcaaagggctacttgaaacttctgcttctcact
gctgcttccaggggcaatgccaatgaaggaattcaaagcaatcgagatctttcaatgatt
cttgatgcccttttgaagacaaagtcacgaactgttttggtggacgtaatcaacaagaat
ggtctgcaaatgttacacaatatcatgaaacaataccggagggattttaaaaagacccca
atactccgaaaacttttgaaggtattagagtatcttgctacaagggatattcttgcactg
gagcatatagtcagaccacctccttatgcagggatggaaagcttcaagcagtctattcta
acactcaccgagcatgatgacaaacaggtgcatcaaattgcgaggaacttccgagacaga
tttatccctaagcatttaagaaaaccttggcgcatcgacagagaagagagatcggagtct
agaagatcacctataaacagcagattcagatcatcacaagaacctagatacgatcatcat
tcgccaagacgtgcagaaccgttttcctcaagggctgcaactcccgaaacaccttctgta
tctgacgggtgcatacaacctacttcctccagccttcccgagacaaatggacgcaagcgt
aaaagcagatgggaccagccgtctacttcaaaagagcaacgaaccatgacagatgtccaa
gacgaccttccacccgggttctcatcgccttgcacggatgcgcctaacgcagtcaccgca
cagccacaagcaaagttcctctctcggttaacagtctcctatgggatcccgcttagcatc
gttcatcagtgtggttcaccctgcaaagacgaccctaatagctggtccgttgctcctggg
gtgccgttcgcaccgtttccacctctaccacctgttactcacggtgagtttttcgctaat
aagggaaacggaacagtctcggcctctccaaagcggaagagagagttttcgtctgatata
ggaacaagttactttcggcaacagaaacagaacgttcctccatggatacgatacaacggg
tgggagaaaacagcaaacagctccatacctaggcatctaactgtagagaagaagatcaac
aatcaagaaaatcttgaatttagagagagaagtacacattccatgaaagttaaaacaatg
cagctcttgatgagaattacagtaaagtcctcttcaggggaatcatgtgcttttcttccc
ccttttggtatattctaa
DBGET
integrated database retrieval system
