Brassica napus (rape): 106354692
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Entry
106354692 CDS
T04128
Name
(RefSeq) SWI/SNF complex subunit SWI3D
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
bna
Brassica napus (rape)
Pathway
bna03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106354692
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bna03021
]
106354692
03036 Chromosome and associated proteins [BR:
bna03036
]
106354692
Transcription machinery [BR:
bna03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
106354692
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
106354692
PBAF complex
106354692
GBAF(ncBAF) complex
106354692
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
ZZ
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
106354692
NCBI-ProteinID:
XP_048635067
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Position
A1:complement(2001082..2005014)
Genome browser
AA seq
932 aa
AA seq
DB search
MEERRRDAGGTLASAGSSGDSPASEPTPRRRVKRKSNALGASNSSSTSSKRMLTREKAML
ASFSPVHNGPLTRARQAPSNMPSATEAKPELLSAPDGEKPKEEEERNKAIREWEALEAKI
EADFEGIRSRGSNVHVVPNHCGWFSWGKIHPLEERSLPSFFNGKLEGRSSDVYIEIRDWI
MRKFHSDPNTQIEGKHLTELEVGDVEAKQEVMEFLDYWGLINFHPFPPPDASSSDGGERD
DGVGDKESLLNSLYRFQADEASSMAAFVQKPRLTAQATTTPSGLFPDPMAAADDSLKQEG
PAVEYHCNSCSADCSLKRYHCPKQADFDLCMECFDSGKFSSDMSSSDFILLEPAKDPGVG
SGKWTDQETLLLLEGIEIFKENWSEIAEHVATKTKAQCMLHFLQMPIEDAFLDQTDHKDP
SIKDTTDIAVSKDEKPVLNDAPVEKEKETENTNLVVEVEAVKEAPEKEDDNEGKVPQESS
KPGDASEETKEVEADQKTPEVEIVIDERCKDEADENVALKALTEAFEDVGYPITPEASLS
FADLGNPVMGLAAFLVRLAGSDVATASARASVKSLNSNSGLLLATRHCFVLEDPPENKED
LTESKSVDAEEKSQKAEDDREMTDSDPGKVNQDSVSEGKQPGSLTESYARNPDSEGQKVS
INAAATKNSEKPADIICKLQDKSSGKELEKPSKDGDKLSSENKAASKATVSKAAADVSQP
EASKDVEMKDTLQSEKDPQDMVKTAGEKAEQAKEDDHSMPDTSVAEQPIGSASLPENGTG
ENLNKEGSKEKNVCAGKKDKHNSGKLKRAAISALSAAAVKAKHLAKLEEDQIRQLSGSLI
EKQLHKLEAKLSIFNDAESLTARVREQLERSRQRLYHERAQIIAARLGVPPSVSSKASLP
ANRIATNFANVAHRPPIGMAFPRPPMPRPPGP
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggaggagagacgacgcgatgctggaggaaccctagcttcggccggcagctccggagac
tctccggcatccgagcccacgccgcggcggcgcgtgaaaagaaaatcgaacgctctcgga
gcctccaattcctcatcaacatcctccaagcggatgctgacgcgcgagaaggcgatgctc
gcgtccttctccccggtccacaacggacctctaaccagagctcgacaggcgccgagcaac
atgccgtccgcgaccgaggcgaagccggagctgctgagtgccccggacggcgagaagccg
aaggaggaggaggagaggaacaaggcgatccgcgagtgggaggccttggaggctaagatc
gaagctgatttcgaagggattagatctcgcggaagcaatgttcatgtggtgcctaatcat
tgcggttggttctcatggggaaagattcatccgcttgaagagcgttcgttaccttctttc
ttcaacggcaagttagaaggtcgcagttccgatgtttacattgaaattagggattggatc
atgaggaagtttcattccgatccaaacacgcaaatagaaggaaaacatttaacagaactc
gaggttggagacgttgaagcaaagcaggaggtgatggagttcttggactactgggggtta
atcaattttcacccgttcccaccaccagacgcgagttctagtgatggtggtgagcgtgat
gatggtgttggggataaggagtctttgctcaacagtttatatcgattccaagcggatgag
gcttcttcgatggctgcttttgttcaaaagcctcgtctcacagcgcaagctactactaca
ccatcagggctgtttccggatccgatggctgctgctgatgactcgctgaagcaagagggt
ccagcggttgaatatcactgtaactcttgttcagctgattgctctctcaagcgctaccac
tgcccgaaacaggcagattttgacttatgcatggagtgctttgacagtggcaagttcagc
tcagatatgtcatcttccgactttatactattggagcctgctaaggatcctggcgttggt
agtgggaagtggactgatcaagagactcttcttctactcgaaggtatagagatctttaag
gagaattggagtgagattgcggagcatgttgctacgaagacgaaagctcagtgtatgctt
cattttcttcaaatgccaatcgaggatgcgtttcttgatcaaactgaccacaaagatccg
agtataaaagacactacggatatagctgtgtctaaagatgagaaacctgttctaaacgat
gcacctgtagagaaagagaaagagacagagaatacgaatcttgttgttgaagttgaagct
gtgaaggaagctccagaaaaagaagatgacaatgaaggaaaagttcctcaggaatcttct
aagcctggagatgcgagtgaggaaactaaggaagtggaagccgaccagaaaacgcctgag
gtagaaatcgtcattgatgaaagatgtaaagatgaggctgatgagaacgttgctctgaaa
gctctgactgaagcttttgaagacgttggttatcccatcacacccgaagcttctttatcc
tttgctgatttgggaaatcctgtcatgggactggcagcttttctggtgagattggcggga
tctgacgttgctactgcttcagccagagcttccgtcaaatctcttaacagcaattctggg
ttgttgcttgccacaagacattgttttgttctcgaagatccaccagaaaacaaggaggac
ttaactgaatcaaaaagtgtggatgcagaagagaaaagccagaaagcagaagatgatagg
gaaatgacagatagtgatccaggcaaagtaaatcaggattcagtctctgaaggaaagcaa
cctggttccctaactgaaagttatgctagaaatccagattctgaaggacaaaaagtatct
attaatgcagccgcaactaaaaattcagagaaaccagcggatattatttgtaaattgcag
gacaaaagttcagggaaggagctcgaaaaaccttcaaaggatggtgataagctttctagc
gaaaataaagcggcctctaaagcaactgtctccaaggcagctgcagatgtttctcagcca
gaagcatcaaaagatgtggagatgaaggatacattacagtccgagaaggatcctcaagat
atggtgaaaacagcaggagaaaaggctgaacaggctaaggaggatgaccacagtatgcca
gacacgtctgttgcagagcagcccattggatcagcttctctaccggaaaatggaacaggt
gaaaatctaaataaagaaggaagtaaagagaagaatgtttgtgcagggaaaaaagacaaa
cataactctggtaagcttaagcgcgcagctatctctgctctctcagctgcggcagtaaag
gcaaagcatcttgcgaagctcgaagaagatcaaatccgacaactttctggatcattaata
gagaagcagttacataaactagaagcaaaactatctatcttcaacgacgctgaaagcttg
acagcgagggtaagagagcaattagagaggtcgaggcaacggctataccatgaaagagca
cagatcatagcggctcgactgggtgtcccgccttcggtgtcctcaaaagcatcattacca
gcaaacagaatcgctacaaattttgctaatgtggctcatagacctcccataggcatggcc
tttccacgcccaccaatgccaagacctccaggtccatga
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