Brassica napus (rape): 106354833
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Entry
106354833 CDS
T04128
Name
(RefSeq) protein RAE1
KO
K14298
mRNA export factor
Organism
bna
Brassica napus (rape)
Pathway
bna03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106354833
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106354833
03036 Chromosome and associated proteins [BR:
bna03036
]
106354833
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106354833
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
106354833
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
Beta-prop_WDR5
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_EML
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Beta-prop_ACSF4
Beta-prop_Aladin
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_RSE1_2nd
Beta-prop_Nup120_160
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_LRRK2
Motif
Other DBs
NCBI-GeneID:
106354833
NCBI-ProteinID:
XP_013650332
UniProt:
A0A816ZIQ7
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Position
A7:28082311..28084967
Genome browser
AA seq
348 aa
AA seq
DB search
MATFGAAANANTNPNKSYEVTPSPADSISSLSFSPRADILVATSWDNQVRCWEISRSGTS
LATAPKASISHDQPVLCSAWKDDGTTVFSGGCDKQAKMWPLLSGGQPVTVAMHDAPIVDM
AWIPGMNLLVTGSWDKTLKYWDTRQQTPVHTQQLPDKCYSLSVKHPLLVVGTADRNLIVF
NLQNPQTEFKRIVSPLKYQTRCVTAFPDQQGFLVGSIEGRVGVHHLDDSQQNKNFTFKCH
RDGNEIYSVNALNFHPVHGTFATAGSDGAFNFWDKDSKQRLKAMSRCSQPIPCSSFNHDG
SIYAYASCYDWNKGAENHNPATAKSSIFLHMPQESEVKAKPRVASGRK
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggctacctttggtgcggcggcgaacgcgaacacgaaccctaataaatcctatgaggtt
actccatcacccgcagattctatctccagcttaagttttagtccaagagctgatattctt
gtcgccacttcttgggacaatcaggtgagatgttgggaaatatctcgtagtggaacctct
ctagctactgctcctaaagcatctatatctcatgatcagccggtcttatgttctgcttgg
aaagacgatggaaccactgtctttagtggaggatgtgataagcaagccaaaatgtggccc
ttgttgtctggtggtcaacctgtaactgttgccatgcacgatgctcctattgtggacatg
gcctggatccccggaatgaatctcctcgttactggaagctgggataagacattgaaatat
tgggatacaaggcagcaaactcctgtgcatactcaacagcttccagataaatgctattca
ttgtctgtgaaacatccgctcttggttgtaggaactgcagataggaatctcattgtcttc
aacttgcaaaatcctcagaccgagttcaagagaatcgtgtcaccactaaagtaccagacg
agatgtgttactgccttccctgatcagcaaggctttttggttggatcaattgaggggcgg
gttggtgtccatcatctggatgattctcagcagaacaagaacttcacattcaaatgccac
agagatgggaatgagatctattctgtcaacgctctgaacttccacccggtacatggcact
tttgccactgctggctcagatggggctttcaatttctgggacaaggatagtaagcaaaga
ctcaaggccatgtcgaggtgcagtcagccaattccttgcagttcgtttaatcacgatgga
tctatatacgcatatgcgtcgtgctatgactggaacaaaggtgcagagaatcacaacccg
gcaacggcgaaaagcagcattttcttgcacatgccacaggaaagcgaggttaaggcgaag
ccaagagtagcaagcggcagaaaatga
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