KEGG   Brassica napus (rape): 106354833
Entry
106354833         CDS       T04128                                 
Name
(RefSeq) protein RAE1
  KO
K14298  mRNA export factor
Organism
bna  Brassica napus (rape)
Pathway
bna03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    106354833
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bna03019]
    106354833
   03036 Chromosome and associated proteins [BR:bna03036]
    106354833
Messenger RNA biogenesis [BR:bna03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     106354833
Chromosome and associated proteins [BR:bna03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    106354833
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR3_1st WD40 Beta-prop_WDR5 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WDR55 WD40_CDC20-Fz Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_EML Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_HPS5 Beta-prop_ACSF4 Beta-prop_Aladin Beta-prop_SPT8 WD40_RFWD3 Beta-prop_RSE1_2nd Beta-prop_Nup120_160 Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_LRRK2
Other DBs
NCBI-GeneID: 106354833
NCBI-ProteinID: XP_013650332
UniProt: A0A816ZIQ7
LinkDB
Position
A7:28082311..28084967
AA seq 348 aa
MATFGAAANANTNPNKSYEVTPSPADSISSLSFSPRADILVATSWDNQVRCWEISRSGTS
LATAPKASISHDQPVLCSAWKDDGTTVFSGGCDKQAKMWPLLSGGQPVTVAMHDAPIVDM
AWIPGMNLLVTGSWDKTLKYWDTRQQTPVHTQQLPDKCYSLSVKHPLLVVGTADRNLIVF
NLQNPQTEFKRIVSPLKYQTRCVTAFPDQQGFLVGSIEGRVGVHHLDDSQQNKNFTFKCH
RDGNEIYSVNALNFHPVHGTFATAGSDGAFNFWDKDSKQRLKAMSRCSQPIPCSSFNHDG
SIYAYASCYDWNKGAENHNPATAKSSIFLHMPQESEVKAKPRVASGRK
NT seq 1047 nt   +upstreamnt  +downstreamnt
atggctacctttggtgcggcggcgaacgcgaacacgaaccctaataaatcctatgaggtt
actccatcacccgcagattctatctccagcttaagttttagtccaagagctgatattctt
gtcgccacttcttgggacaatcaggtgagatgttgggaaatatctcgtagtggaacctct
ctagctactgctcctaaagcatctatatctcatgatcagccggtcttatgttctgcttgg
aaagacgatggaaccactgtctttagtggaggatgtgataagcaagccaaaatgtggccc
ttgttgtctggtggtcaacctgtaactgttgccatgcacgatgctcctattgtggacatg
gcctggatccccggaatgaatctcctcgttactggaagctgggataagacattgaaatat
tgggatacaaggcagcaaactcctgtgcatactcaacagcttccagataaatgctattca
ttgtctgtgaaacatccgctcttggttgtaggaactgcagataggaatctcattgtcttc
aacttgcaaaatcctcagaccgagttcaagagaatcgtgtcaccactaaagtaccagacg
agatgtgttactgccttccctgatcagcaaggctttttggttggatcaattgaggggcgg
gttggtgtccatcatctggatgattctcagcagaacaagaacttcacattcaaatgccac
agagatgggaatgagatctattctgtcaacgctctgaacttccacccggtacatggcact
tttgccactgctggctcagatggggctttcaatttctgggacaaggatagtaagcaaaga
ctcaaggccatgtcgaggtgcagtcagccaattccttgcagttcgtttaatcacgatgga
tctatatacgcatatgcgtcgtgctatgactggaacaaaggtgcagagaatcacaacccg
gcaacggcgaaaagcagcattttcttgcacatgccacaggaaagcgaggttaaggcgaag
ccaagagtagcaagcggcagaaaatga

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