Brassica napus (rape): 106354996
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Entry
106354996 CDS
T04128
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bna01009
]
106354996
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bna03021
]
106354996
Enzymes [BR:
bna01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
106354996
Protein phosphatases and associated proteins [BR:
bna01009
]
HAD phosphatases
Fcp/Scp phosphatases
106354996
Transcription machinery [BR:
bna03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
106354996
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Spore_YunB
Motif
Other DBs
NCBI-GeneID:
106354996
NCBI-ProteinID:
XP_022544320
LinkDB
All DBs
AA seq
841 aa
AA seq
DB search
MFSCFRFFPISSVSSNMSKDHEAIAINDAVHKIQLALLNGITSQTHLFSARALMSQSDYE
DVVTERTIAKLCGYPLCRSPLPSDVVSRRGKYRVSLKEHRVYDVRESRKFCSGECLVSSR
AFEKSLQEVRTSEFDMVKLGGIVGLFGDGDVVEEEEGLGLGKLSICEKSDVMRGGEVDLE
EWMGPSSAVEGYVPVDRSSCKFKDGSKESKAKNKQKKQEEPSFNEMGFTSTVIVPDECSV
PSNYNSKQDAKATKNKQKKQEEPPFNEMGFTSTVIVPDECSVSNYNSRQDSKAKNNQKKQ
EDPPFNEMGFTSEVIIPDECSVSKVPPQTKQTPPVVKPEDGQGKTPKKSRFRREKEKEKI
DLASFGFDAMGCASPVTGNDGYSVEYSVSKQPPCSKEDPLDGQMKDSLKPLDEKSSSSAS
KGKGFKPPPRRKQASHVGESSKGKTVVKITEKDIQSSLVDEMGVMRDGYSVEYNVSKQPP
CSMPLDKKNALLGSSSSSNTKALGKKVISDSCEGLKAHQDMCSSSETVTKSCLKVSGSKK
LSHSVTWADQSDVRGDLCEVRSDDTEDVNSVSRLALAEACAKALSHAAEAVSSGDLDASD
AAAKAGIVLLPSTHQLDEEVSEEEMSEEEEEEEEEATLLKWPNKPGTPDSDLFDRDQSWF
DETPEGFNLTLSPFAMMWDSLFGWVSSSSLAYIYGKDESAHEEFLSVNGKEYPRRIRLGE
GLSSEIKETVAGCLARAVSRVATDLRLPVPISELEKGLGSLLETMSLTGAVPSFRIEQWL
VVVLLFLDALSVCRIPRIAPYLLNRNKVLEGSGIGNEEYETMKEILLPLGRVPQFATLCG
A
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgttcagttgtttcagatttttcccaatctcctccgtcagttcgaacatgtcgaaggac
cacgaagcaatcgcaatcaacgatgcggttcacaagatccagctcgctctcctcaacggc
atcacttcacaaacccacctcttctccgcaagggccctgatgtctcaatcggactacgaa
gacgtcgtcacggagcgaaccatcgccaagctctgcggctaccctctctgcagatccccc
ctcccttccgacgtcgtttccaggagagggaagtaccgcgtctccctgaaggagcacagg
gtctacgatgttcgggagagtaggaagttctgctcgggggagtgtcttgtgagcagcaga
gcgtttgagaagagtttgcaggaggtccgtacctcggagtttgatatggtgaagcttggt
gggattgttgggttgtttggtgatggggatgtggtggaagaggaggagggtttggggttg
gggaagttgagtatttgtgagaagagtgatgtgatgagaggtggggaggtggatttggag
gagtggatgggtccttctagtgctgttgaaggttatgttcctgttgatcgaagcagttgc
aaatttaaagatggcagtaaggagtccaaggctaagaataaacaaaagaagcaggaggaa
ccgtcttttaacgagatgggttttactagcacggttattgttcctgatgagtgtagtgtt
cctagcaattacaactctaaacaagatgctaaggctactaagaataaacaaaagaagcag
gaggagccgccttttaacgagatgggttttactagcacagttattgttcctgatgagtgt
agtgtaagcaattacaactccagacaggattccaaggctaagaataatcaaaagaaacag
gaggatccgccttttaacgagatgggtttcactagcgaagttatcattcctgatgagtgc
agtgtttcaaaggttccgccacagaccaaacaaactcctcctgtggtgaaacctgaggat
ggccaagggaaaacaccaaaaaaatcgaggtttcgtcgtgaaaaggaaaaggaaaagatc
gatttggcgagctttgggtttgatgcaatgggctgtgcgagccctgtcactgggaatgat
ggatacagcgttgaatatagcgtgtctaagcagcctccttgttcaaaggaagaccctctt
gatggccaaatgaaagatagtctcaagcctctggatgagaaaagttcctcttctgcgtct
aaagggaaagggtttaagcctccaccacggcgaaaacaagcttctcatgtaggcgaatca
agcaaagggaaaacagttgtgaaaattacggagaaggacattcaaagttctctggttgat
gagatgggtgtaatgagagatggatacagtgtggaatataatgtgtctaagcagccacca
tgttcaatgccgttggacaagaaaaatgctctactaggatcatcatctagttctaataca
aaagccttgggaaagaaagttatttctgattcttgtgagggacttaaagctcatcaggat
atgtgttcatcaagtgaaaccgtcactaagtcatgccttaaagtctctggctctaagaag
ctaagccattcagttacttgggctgatcagagtgacgtccgtggtgatctttgtgaggtt
agaagcgatgatacagaggatgtgaacagtgtctcacgccttgcattagcagaagcatgc
gctaaggcgttgagccacgctgctgaagctgtttcttcgggagatttagatgcaagtgat
gctgctgcaaaagctggaatcgttttgttgccaagcacacatcaacttgatgaagaggtt
tccgaggaggaaatgagtgaagaggaggaggaggaggaggaggaagcaactcttctgaag
tggccaaacaagccagggacgccagattctgatttattcgaccgtgatcagtcttggttc
gatgaaactccagaggggttcaatctaactttatcaccttttgctatgatgtgggactca
ctgtttggatgggtctcatcctcttcacttgcgtatatctatgggaaggatgagtctgct
catgaggagttcttgtcagttaacgggaaggagtatcccaggaggattagattgggagaa
gggctttcgtcagagatcaaggagacagttgctgggtgtcttgcaagagctgtgtctaga
gtcgccactgatcttaggctgccagttcctatatccgagctggaaaagggactaggaagc
ttgttggagacaatgtcgttgacaggggcggttccgtcgtttaggatagagcaatggtta
gtggttgtacttctgttcctggacgcgttgtctgtgtgccggatccctcggattgcgcct
tatttattaaacagaaacaaggtgttggaaggaagtgggattggtaatgaagagtatgag
acaatgaaggagattctgttaccgcttggccgtgttcctcagtttgctacactatgcggg
gcttaa
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