Brassica napus (rape): 106355650
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Entry
106355650 CDS
T04128
Name
(RefSeq) autophagy-related protein 18a-like
KO
K22991
WD repeat-containing protein 45
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106355650
Membrane trafficking [BR:
bna04131
]
Autophagy
Other autophagy associated proteins
Others
106355650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
WD40_Prp19
ANAPC4_WD40
Beta-prop_Vps41
BCAS3_WD40
WDR55
Beta-prop_IFT140_2nd
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Ge1_WD40
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
106355650
NCBI-ProteinID:
XP_022544674
LinkDB
All DBs
Position
A7:complement(18787353..18789464)
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AA seq
416 aa
AA seq
DB search
MATVSSSPWPNPNTPPSDSDSHHRGDDAEPLDSFSSMTLTSSEDPNHNSDQIQTPSSPPA
TPPPSLLHLSFNQDHACFAVGTSRGFRILNCDPFREIFRRDFDRGGGVAVVEMLFRCNIL
AIVGGGPDPQYPPSKVMIWDDHQSRCIGELSFRSDVRSVRLRRDRIVVVLEQKIFVYNFV
DLKLMHQIETIANPKGLCAVSQGGGGSMVLVCPGLQKGQVRIEHYASKRTKFVMAHDSRI
ACFALTQDGGLLATASSKGTLVRVFNTVDGTLRQEVRRGADRAEIYSLAFSSNAEWLAVS
SDKGTVHVFGLKVNSGSQVKDTPRIAAELTRSSSSPSSSLSLFKGVLPKYFSSEWSVAQF
RLVEGTQYIVAFGHQKNTVVILGMDGSFYRCQFDPVNGGEMSQLEYHNCLKPPSVF
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgtctcctcctctccctggcctaaccccaacacgcctccctcagattccgac
tctcaccaccgtggagacgacgccgagcctcttgattccttctcctccatgactctcacc
tcctccgaagatcccaatcacaattccgatcagattcaaaccccttcctctccccccgcg
acgcctcctccgtcgctcctccacctctccttcaaccaagaccacgcctgcttcgccgtc
ggcacctcccgcggcttccgcatcctcaactgcgaccccttccgcgaaatcttccgccgc
gacttcgaccgcggcggcggagtcgccgtcgtggagatgctcttccgatgcaacatccta
gccatcgtcggcggcgggcccgacccccagtaccctcccagcaaggtcatgatctgggac
gatcaccagagcaggtgcatcggcgagctctccttcaggtccgacgttagatccgttcgc
ctcaggagggataggatcgtcgtcgttcttgagcagaagatctttgtctacaacttcgtg
gacctcaagctgatgcatcagattgagacgattgcgaatccgaaggggttgtgtgctgtc
tctcagggtggtggtggttcgatggtgttggtgtgtcctggcttgcagaaaggacaggtg
aggatcgagcattatgcttctaagaggactaagttcgttatggctcatgattcgaggatt
gcttgctttgctctcacgcaagatgggggtttgttggctacggctagctctaaggggact
ctggttcgggtgtttaatactgttgacggcaccttgcgccaagaggttaggaggggtgca
gatagagcggagatatatagtctggctttctcttcaaatgctgagtggctagctgtctca
agcgacaaaggaactgtccatgtctttggcctcaaagtcaactccggctctcaagtgaaa
gacacaccacgaattgctgctgaacttacccgctcttcctcatccccatcatcgtctctg
tcattattcaaaggagttttgccgaagtatttcagctcggagtggtcggtggctcagttt
cggttggttgaaggaactcagtacatagtcgcgtttggtcatcagaagaacactgttgtt
attcttggcatggatgggagcttctacagatgccagtttgatccagtgaacggaggagaa
atgtctcagctcgagtatcacaactgtctaaaaccgccttctgttttctag
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