Brassica napus (rape): 106357118
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Entry
106357118 CDS
T04128
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 2
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
bna
Brassica napus (rape)
Pathway
bna04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106357118
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106357118
Enzymes [BR:
bna01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106357118
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
106357118
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
DUF7419
ZnF_RZ-type
zf-C3HC4_2
MscS_TM
Myc_N
Motif
Other DBs
NCBI-GeneID:
106357118
NCBI-ProteinID:
NP_001302908
UniProt:
Q93YL2
LinkDB
All DBs
Position
A7:complement(22603139..22604736)
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AA seq
351 aa
AA seq
DB search
MMKETNAAGEASSSLRRHRKRQRLPSVENGRETASVDGDEVIPEARSGALLDLDLLDCPV
CFQALTQHVFQCDNGHIACSSCCRELRNKCPACALPIGNNRCRIMERVVESVTVPCPNAK
HGCTEKFSYGKELAHEKECRFALCYCPAPDCNYAGVYKDLYTHYDANHKDTSTRFVCDTL
HRTYLGTVSTTSVLQEYRDGPLVVVQGFVVAHGLSVTVNCIAPSAPGVGKFSFNLTYTLG
RHTVTFGSTEMNRIQKVSLETPQSDFMSIPSYLVSPIIVKNLRICIRRLEEEAGEDEEEE
EAGEEEEAGEEEEEAGEEEEEEEAVEVDVVNNVRRSTRQKKGNSKYQNKVK
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaagagacgaacgccgcaggagaagcgtcgagcagcctccgccgccaccgaaag
agacaacgacttccttccgttgagaatggcagagaaacggcgagtgtagacggcgatgaa
gtgataccggaggcacgatcgggggcgctactcgatttggatcttctcgattgtcccgtt
tgctttcaagcactgacccaacatgtttttcagtgtgacaatggacacatagcttgttct
tcctgctgtcgtgaactgagaaacaaatgccctgcctgcgctttacccattggtaataac
cgatgcagaatcatggagagagttgttgaatcagtcactgtcccgtgtccgaacgccaaa
catggttgtacggagaagttctcttacggcaaagaattagctcatgagaaagaatgccgt
tttgctctttgttattgccctgcacctgactgcaactacgctggtgtgtacaaagatctc
tacactcactatgatgctaaccacaaggatacatcgacccgcttcgtgtgtgacactctc
caccgcacatatcttggcacagtttcgactacttcagtccttcaggaatatagagatggt
ccattggttgtggttcagggtttcgtggtggcacatggattgtctgtgactgtgaactgt
atagcaccgtctgctccaggagttgggaagttttccttcaatttaacctacacgttggga
cgtcacactgtgacgtttggatcaacggagatgaacaggattcagaaagtgagcttggaa
actcctcagagcgacttcatgtcgattccttcatatttggtttcaccgattattgttaag
aacttgcgtatatgcatccgccggctagaagaagaagctggtgaagatgaagaagaagaa
gaagctggtgaagaagaagaagctggtgaagaagaagaagaagctggtgaagaagaagaa
gaagaagaagctgttgaggttgatgttgttaacaatgttcgcaggtcaactcgtcagaag
aagggtaactccaaataccaaaacaaagtcaagtaa
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