Brassica napus (rape): 106357474
Help
Entry
106357474 CDS
T04128
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 5
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
bna
Brassica napus (rape)
Pathway
bna04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106357474
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106357474
Enzymes [BR:
bna01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106357474
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
106357474
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_RING
Sina_ZnF
Myc_N
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
106357474
NCBI-ProteinID:
XP_013652590
UniProt:
A0A816Z3E7
LinkDB
All DBs
Position
A7:complement(22609980..22613041)
Genome browser
AA seq
340 aa
AA seq
DB search
MPPPPRNPDHRSPKRPRFPLSPPVPEEEEEEDDDEFSDVSANDVEDRSDESADDEEDDVE
VVAVVTVAEAQSRGYLGSSSSSSSIPSSPVKLNSTEILDCPTCLEPLRGPIYQCHNGHIT
CSPCLPRVYKHCPVCRMPIGDIRCRAMEMVIESSSVPCRYAMYGCKETTLYGDQAHEKVC
LYTRCQCPVTNCNYAGGYKEVEAHARLLHSWDVEDLTPFVFNTPQIFSINLARTSRAVFQ
EEKEGDMIVVQTFKRTNAGLCVTVNHIAPLSLGLPNLSCSIAKLNSFTTLRLGVMVKRIQ
NVREQEEPSEDFLFIPDYMLIDNHLKMQICVGSEFKYVHI
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctcccccgagaaaccccgaccaccgttccccgaagaggccacggttccctctt
tctcctcccgtccctgaagaggaagaagaagaagacgacgacgagttcagcgacgttagt
gccaatgacgtggaagatcgcagcgacgaaagtgccgatgacgaagaagacgacgtcgaa
gtagtcgctgtcgttacggtagcggaggctcagtcgagaggataccttggcagcagcagc
agcagcagcagcatccctagctcccccgttaagctgaacagcactgagattctcgactgt
cccacttgcttagagccactcaggggccccatctatcagtgtcataatgggcatataact
tgttctccgtgcctccccagagtctataagcactgccctgtctgtaggatgcccatcggt
gacatcagatgcagagccatggagatggtcattgaatcatcttctgtcccctgtcgttac
gccatgtacgggtgtaaagaaaccacgttgtatggggaccaagcacatgagaaggtgtgt
ctatacacccgttgccagtgccccgtaacgaactgcaactacgccggcggctacaaggag
gttgaggcccacgctcgtcttctgcactcttgggacgtggaagacctcaccccgttcgtg
ttcaacacccctcagatatttagcatcaacctggctaggaccagtagggcagtttttcag
gaagagaaggagggcgatatgattgtggtccagactttcaaaaggactaacgctggtctt
tgtgtgaccgtgaaccatatcgcgcctttgtctcttggattgcccaacctctcgtgcagt
atagctaagctcaattcgtttacgacgctaaggcttggggtgatggtgaagagaatccag
aatgtgagagagcaggaagaacccagtgaggacttcttgtttattccggattatatgttg
attgataatcacttgaagatgcagatttgcgtcggaagtgaatttaagtatgttcatatc
tga
DBGET
integrated database retrieval system
