Brassica napus (rape): 106357637
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Entry
106357637 CDS
T04128
Name
(RefSeq) preprotein translocase subunit SCY1, chloroplastic isoform X2
KO
K10956
protein transport protein SEC61 subunit alpha
Organism
bna
Brassica napus (rape)
Pathway
bna03060
Protein export
bna04141
Protein processing in endoplasmic reticulum
bna04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
106357637
04141 Protein processing in endoplasmic reticulum
106357637
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
106357637
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106357637
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
bna02044
]
106357637
Membrane trafficking [BR:
bna04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
SEC61 complex
106357637
Secretion system [BR:
bna02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
106357637
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecY
TssN
Motif
Other DBs
NCBI-GeneID:
106357637
NCBI-ProteinID:
XP_013652765
UniProt:
A0A078FLF1
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Position
C7:5041387..5044226
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AA seq
550 aa
AA seq
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MITVSQVSSYSSSSSNLASLSRLNHKPSSRLRSSSLYRPIFSVPTKTRNTCKANSWKNLG
LVINSRSSEVSTFDPLGINPKEASGLSSIWESFLSVLSPSLESSSGSKRDKPSSGRGVAA
AIEDSSIDFGDFFKGPLPGKFLKLLGFLALSRLGIYIPLGGVNREAFVGNLDQNSLLTTL
DTFSGGGIGRLGICSLGIVPFINAQIVFQLLAQVYPKLQDLQKKEGEAGRKKILQYTRYA
SVGFAIVQAIGQAVYLRPYVNDFSTEWVVSSVTLLTLGSVLTTYIGERISDLKLGNGTSL
LIFTSIISYLPASFGRTAAEALQEGNYTGLATIVVSFLLLVLGIVYVQEAERKIPLNYAS
RYTSKAAGLQKSAYLPFKVNSAGVMPIIFSTSSLALPATLARFTGISALKNIAYGLNPGC
SFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTALFIKTVLGRIS
VLGSAFLAVLAAGPAVVEQITHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI
EFYELDKYDP
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgataacggtaagccaagtttcctcttactcttcttcttcttcaaacctcgcttctctg
tctcgtctcaaccacaaaccatcctcgagactccgaagctcttctctgtacagaccaatc
ttctccgttccgaccaaaaccaggaacacttgtaaagccaattcatggaagaatctcggt
ctggtcatcaactctagaagctctgaggtttcgacatttgatccgttgggtattaatcca
aaagaagcttctggcctgagtagtatttgggaaagctttctgagtgttttgtctccatca
cttgaaagctcctccggtagcaaaagagataaaccatcttctggtcgtggcgtggcagct
gctattgaggacagttccattgactttggagatttcttcaaaggcccattgcctgggaag
ttcctaaagctcctcggcttcctagctctctctcgcctcggaatctacatcccactaggc
ggagtcaaccgagaagcctttgtcggcaacttggatcagaacagcttgttaaccacattg
gacacattctccggtggtggcattggtagactcggcatatgctccctcggtatcgtccct
ttcatcaacgcccagatcgtgtttcagcttctcgctcaagtctaccccaagctgcaagac
cttcagaagaaagaaggcgaagcggggagaaagaaaatcctccagtacactcggtacgct
tcggttggattcgctatagtacaggcgataggacaagcggtttacctccgtccttacgtg
aatgacttcagcactgaatgggttgtttcgtccgtcacgttgctaacacttggctctgtc
ctcactacttatattggagagaggatctccgatctgaagcttggaaacggcacttcgctt
ttgatattcacgagtattatctcttacttgcctgcttcatttggtagaacagcagcagaa
gcattacaggaaggaaactatactggtctggctaccatagttgtttcattcctcctcttg
gtacttggaatcgtctatgttcaggaagcagagaggaagattccactcaactatgcctcc
agatacaccagcaaagcagctgggctgcagaagtctgcttatcttccattcaaggtcaat
agtgctggagtgatgcctatcatattctccacgtcatctcttgctctccctgctactcta
gcgcgattcaccggcatttctgctctgaagaatattgcttatggcttgaaccctggatgt
tcgttctatcttccaacaaatatacttctcatagctttcttcaactactactacactttc
ctgcaacttgacccggacgatgtgagtgaacaattgaaacgacaaggtgcatccatccct
cttgtccggcctggtaaaagcactgctctcttcatcaaaaccgttcttggccggatatct
gttcttggatcagcatttctggctgttctagcggcgggtcctgctgtggttgaacagatc
actcacttgacagcattcagaggatttgctggaacttctgttctgattctcgtagggtgc
gcgacagatactgcaagaaaggttcaagctgagatcatctcgcagaagtacaagaacatt
gagttttatgagcttgacaagtatgatccatga
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