Brassica napus (rape): 106357751
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Entry
106357751 CDS
T04128
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A
KO
K07466
replication factor A1
Organism
bna
Brassica napus (rape)
Pathway
bna03030
DNA replication
bna03420
Nucleotide excision repair
bna03430
Mismatch repair
bna03440
Homologous recombination
bna03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
106357751
03420 Nucleotide excision repair
106357751
03430 Mismatch repair
106357751
03440 Homologous recombination
106357751
03460 Fanconi anemia pathway
106357751
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bna03000
]
106357751
03032 DNA replication proteins [BR:
bna03032
]
106357751
03400 DNA repair and recombination proteins [BR:
bna03400
]
106357751
Transcription factors [BR:
bna03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
106357751
DNA replication proteins [BR:
bna03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
106357751
DNA repair and recombination proteins [BR:
bna03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
106357751
MMR (mismatch excision repair)
106357751
DSBR (double strand breaks repair)
HR (homologous recombination)
106357751
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
Rep-A_N
REPA_OB_2
tRNA_anti-codon
CDC24_OB3
DUF223
zf-like
Motif
Other DBs
NCBI-GeneID:
106357751
NCBI-ProteinID:
XP_013652901
LinkDB
All DBs
Position
C7:complement(12364644..12367645)
Genome browser
AA seq
631 aa
AA seq
DB search
MPVTLTPNAIAAINTGDVNLKPLLQVLDIRLIGKTQERGQERYRLLISDGVSAQHAMLAV
QLNDRVKSGQVEKGSIVQLIDYICSDVKGRRLTIVLNMETIVPQSETIGNPTMSAESNTE
FQKPLPGPGNIHPPSRVGSIEQHSTNKVPPRGVNNTPSVQPAYQPPPSYRNHGPIMKNEA
PARIIPIAALNPYQGRWAIKARVTAKGDIRRYNNAKGDGKVFSFDLLDSDGGEVRITCFN
AVVDRFYDVIEVGKVYLISKGSLKPAQKNFNHLKNEWEIFLESASTVELCPDEDGSIPRQ
QFSFRPIGDVEKAENNAILDIIGVVTSVNPSVPILRKNGMETHRRTLNLKDDSGKAVEVT
LWGEFCNRDGRELEEMVGSAFYPVLAIKAGKVSDFSGKSVGTISSTQLFINPDFPEAQKL
RNWFDHGGKDTASSSISRDNMPGGGSRNEIRKVVSQIKEEGLGRSDKPDWFTVKATIAFI
KTDSFCYTACPLMIGDKQCNKKVTRTGTNMWLCDRCNQEFEECDYRYLLQVQIQDHTGMA
WVTAFQESGEEIMGCPAKQLYTLKHESQNDEEFAVIVRNRLFHQYMLKLKIKEETYGEEH
RLKMTVVKVDTVNYTSESRYLLNLLVGSLQV
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgactttgactccgaacgccatcgcggcgattaacacaggcgacgtcaatctg
aagccgctgttacaggttttagatatcagattgattgggaaaactcaggagagaggccag
gagaggtaccgtttgctaatctcagatggtgtctcagctcagcacgctatgctcgctgtt
cagctcaacgatcgggttaagtcaggacaggttgagaagggatccattgttcagctcatc
gattacatttgtagcgacgttaaaggccgcaggcttactattgtgctgaacatggagacc
atagtaccacagtctgaaaccattgggaacccaacaatgtctgcagaatctaatacagaa
ttccaaaagccacttccaggtccaggcaacatacatcctccgagtagggttggttcaatt
gagcagcattcaactaataaagtgcctcccaggggtgtaaacaatactccatctgttcag
cctgcatatcaaccacctccaagctacagaaatcatggacccataatgaagaacgaggct
ccagctcgaatcatccctatcgctgctctcaatccatatcaaggtcggtgggctattaag
gctagagtaactgcaaaaggagatatcaggcgttataacaacgcaaaaggagacgggaaa
gtattctcttttgatctgcttgactctgatggaggggaggttcgtatcacttgcttcaat
gctgttgttgaccgattctatgatgttattgaggttggtaaggtgtatttgatttcaaag
ggaagtttgaagcctgcacagaaaaacttcaaccacttaaagaacgaatgggaaattttc
ttggagtcagcatcgactgtggagctttgtcccgatgaagatggctccataccaaggcag
cagttctccttccgtcctataggcgacgttgagaaggctgaaaacaatgccatactcgat
atcattggggttgtgacttctgtgaacccttctgtcccaatcctgaggaagaacgggatg
gaaacccatcggagaaccctcaatctgaaggatgattcaggaaaggccgttgaggttacg
ctatggggagagttctgtaaccgagatggtcgggaacttgaagagatggttggttcagcc
ttttaccccgttttagcaataaaagctggaaaagtaagcgacttcagtggtaaatcagtt
gggacaatatcgtcaacacagctcttcataaatccagattttcctgaagctcagaaactg
aggaactggttcgatcacggtggaaaagatactgcatcctcctccatttccagagacaat
atgcctggaggaggttcgaggaacgagatacgaaaagttgtttcccagatcaaagaggaa
ggtcttggaagatcagacaagcctgactggttcacagtgaaagcaaccatagcattcatc
aaaactgatagcttctgctacacagcttgtcctttgatgattggagataagcaatgcaac
aagaaggtgacacggactggaacaaacatgtggctctgtgaccggtgcaaccaagagttt
gaggaatgcgactacagataccttcttcaagtgcagattcaagaccacactgggatggct
tgggtaacggcgttccaagaatccggtgaagaaatcatgggatgtccggctaagcagctt
tacacgttgaagcacgaatcgcagaatgatgaggaattcgcagtgattgttagaaacaga
ctgtttcatcagtacatgttaaagttgaagatcaaagaggaaacttatggggaggaacac
agactgaagatgactgtggtgaaggttgatacggtgaattacacatccgagagtagatac
ttgctcaacttgctcgttgggtctctacaggtataa
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