KEGG   Brassica napus (rape): 106357788
Entry
106357788         CDS       T04128                                 
Name
(RefSeq) THO complex subunit 4A-like isoform X1
  KO
K12881  THO complex subunit 4
Organism
bna  Brassica napus (rape)
Pathway
bna03013  Nucleocytoplasmic transport
bna03015  mRNA surveillance pathway
bna03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106357788
  09122 Translation
   03013 Nucleocytoplasmic transport
    106357788
   03015 mRNA surveillance pathway
    106357788
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bna03019]
    106357788
   03041 Spliceosome [BR:bna03041]
    106357788
Messenger RNA biogenesis [BR:bna03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     106357788
    TREX complex
     106357788
Spliceosome [BR:bna03041]
 Complex C
  Other components
   EJC/TREX
    106357788
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    106357788
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_3
Other DBs
NCBI-GeneID: 106357788
NCBI-ProteinID: XP_048602571
LinkDB
Position
C2:complement(6217301..6218722)
AA seq 227 aa
MATGLDMSLDDVIAKNRKSRGSGSGPGPTRRNNPNRKSNRSAPYQSAKAPESTWEHEAFP
SRSTRSSAGIETGTKLYISNLDYGVMNDDIKELFSEVGELKRYTVHFDRSGRSKGTAEVV
YSRRGDAIAAVKKYNDVQLDGKPMKIEIVGTNLQTQSARPGNPNFYSGSRRRGGQGRGGQ
QQRGGSGGGGRGRGGGRRPGKGPAEKVSAEDLDADLDKYHAADMETN
NT seq 684 nt   +upstreamnt  +downstreamnt
atggcgactggattagatatgtctctggacgacgtgatcgccaagaaccgcaagtctcgt
ggatccggatccggaccgggtccaacccgccgcaacaaccctaatcggaaatccaaccga
tctgctccgtaccaatcagccaaggcgccggagtccacctgggaacacgaagctttccct
tcccgatcaacccgttcttccgccggaatcgaaaccgggacgaagctctacatctccaat
ttggattacggtgtcatgaacgatgacatcaaggaactgttttctgaagttggtgagctt
aaacgctacacagtacacttcgacaggagtggaagatcaaagggaactgctgaagtagta
tactctcggcgcggtgatgcaatagcagctgtgaagaagtacaatgatgttcagctggat
gggaaacccatgaagatagagattgtgggcactaatcttcagacccagtctgctagacca
gggaatccaaacttttatagtggttcaaggcgcagaggaggacaagggagaggtggtcaa
caacaacgtggtggtagtggaggaggaggccgtggtagaggtggtggcaggcgtcctggc
aagggcccagcagagaaggtatctgctgaagatcttgatgcggatcttgataagtaccac
gcagcagatatggagacaaactga

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