Brassica napus (rape): 106357937
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Entry
106357937 CDS
T04128
Name
(RefSeq) 15-cis-zeta-carotene isomerase, chloroplastic
KO
K15744
zeta-carotene isomerase [EC:
5.2.1.12
]
Organism
bna
Brassica napus (rape)
Pathway
bna00906
Carotenoid biosynthesis
bna01100
Metabolic pathways
bna01110
Biosynthesis of secondary metabolites
Module
bna_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
106357937
Enzymes [BR:
bna01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.12 zeta-carotene isomerase
106357937
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Motif
Pfam:
NnrU
PEMT
ICMT
DUF2105
Motif
Other DBs
NCBI-GeneID:
106357937
NCBI-ProteinID:
XP_013653115
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Position
C5:complement(4738568..4740289)
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AA seq
363 aa
AA seq
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MAVYHLLLSTSPSLALPPRRPNFSSTRRIPAHPRLTKLPSSPPSSSLPAIRKTLVRSTLR
EDPVSPDAESPTLMIGEDSAAFELGKQKLVSWVYFGVILGVVLYVLNVVWIDNSTGFGKS
YIDAVSTISGSPEVAMLMLILIFATVHSGLASLRDVGEKLIGERAFRVLFAGVSLPLAMS
TIVFFINHRYDGSQLWQLQGVPGVHEAIWVANFVSFFFLYPSTFNLLEVAAVDKPKMHLW
ETGIMRITRHPQMVGQIVWCLAHTLWIGNSVAASASLGLIAHHLFGAWNGDRRLAKSYGD
AFEGIKKRTSIIPFAAIIEGRQVLPEDYYKEFVRLPYLAITALTVGAYFAHPLMQGASFR
LHW
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atggcggtttatcatctcctcctctcgacctctccttcgcttgctcttcctcctcgccgt
cctaacttcagctcaacccgccggataccagctcaccctcgtctcactaaactccccagc
tcgccgccttcttcctctctaccggcaattcggaaaacactcgtccgtagcactctccgg
gaagaccccgtatctccagacgcagagagtccaactctgatgatcggagaagactctgct
gcttttgaattaggcaaacagaagctcgtttcctgggtttatttcggcgttatccttgga
gtcgtcctctacgtcctcaacgttgtttggatcgataactccaccggtttcggaaaatcg
tacatcgacgccgtctccaccatctccggctcaccggaggtggcgatgttgatgcttatc
ctcatattcgcaactgtgcatagtggattagcgagtctgagagatgtaggagagaaactc
ataggcgaacgagcatttcgtgttctctttgctggtgtctctcttcctttagctatgagc
accattgttttctttataaaccatagatacgatgggtcacagttatggcagcttcagggt
gttcccggtgtccatgaagctatttgggtcgctaactttgtgtccttcttctttctctat
ccttcaactttcaatctcctggaggtggctgctgttgataagcccaagatgcatctgtgg
gagactggcatcatgagaatcactcgtcatcctcagatggttggacagatcgtttggtgt
ttggcacatactctctggattggaaactcagtagctgcatcggcttctcttggcttgatt
gcacaccatttgtttggagcgtggaatggagacaggagattggcgaaaagttacggagat
gcttttgaagggatcaagaagagaacgagtataattccgtttgccgccattattgaagga
cgccaagttttgcctgaggattactacaaagagtttgttaggttgccttatcttgcaatc
acggcgttaacagttggtgcctattttgctcacccgctaatgcaaggtgcaagcttcagg
cttcattggtag
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