Brassica napus (rape): 106357940
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Entry
106357940 CDS
T04128
Name
(RefSeq) ADP-ribosylation factor GTPase-activating protein AGD4 isoform X1
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
bna
Brassica napus (rape)
Pathway
bna04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
106357940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106357940
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bna04147
]
106357940
Membrane trafficking [BR:
bna04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
106357940
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
106357940
Exosome [BR:
bna04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
106357940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
Ank
PH
Ank_2
BAR
Ank_3
Ank_5
Ank_4
PH_11
PH_8
PH_13
ANK_LRRK2
PH_20
DUF5683
Motif
Other DBs
NCBI-GeneID:
106357940
NCBI-ProteinID:
XP_013653117
UniProt:
A0A078G1X9
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All DBs
Position
C5:complement(4748632..4753804)
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AA seq
769 aa
AA seq
DB search
MAAFINLEDSPMFQKQVCSLEGTAEELKDRCQKLYKGVKKFMGVLGEASKGESAFADCLE
EFGAGHDDPISLSIGGPVISKFINTLRELASYKEFLCSQVEHVLLERLMNFINVDLQEAK
ESRHRFDKAAHSYDQSREKFVSLKKNTRGEIVAELEEDLENSKSTFEKSRFNLVNSLMTI
EAKKKYEFLESISAIMDAHLRYFKLGYDLLGQLEPYIHQILTYAQQSKEQSKIEQDRLAR
RIQEFRTQSELDSQQLAANAEISGVNGNRVVGTIPYKNTETSLTADKEVIKQGYLLKRSS
SLRTDWKRKFFVLDSHGSMYYYRNNGNKSMGSQHHYSGSSDHTGVFGRFRARHNRSASLT
EGSLGYKTIDLRTCLIKLDAEDMDLRLCFRIISPQKTYTLQAENGADRMDWVNKITAAIG
TLLNSHFLQQSPVQYTGSAPPKGVVSMDQSQHNDARRDMGDDVSTILRGIAGNNVCAECN
APDPDWASLNLGVLLCIQCSGVHRNLGVHISKVRSLTLDVKVWEPTILDLFRNLGNLYCN
SLWEGLLHLDDDCENESTLSRASISKPSPDDSFTVKEKYILAKYLEKALVIKDESKANPS
AASRIWEAVQSRNIREIYRLIVTSGDVNFINTKFDDITDVDAYHHADASEEAVKKRRDPT
ACQRIKDSNEPGNCLQGCSLLHVACHIGDSVLLELLLQFGADPNMRDYHGRTPLHHCISS
GNHKFAKILLRRGARPSIEDDGGLSVLERAMEMGAITDEELFLLLAECA
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctttatcaatctggaagactccccaatgtttcagaaacaggtttgttccttg
gaagggacagctgaagagcttaaagatcgttgtcagaagctatacaaaggtgttaagaag
tttatgggagttctgggagaagcatcaaaaggagaaagtgcctttgcagattgtcttgaa
gaatttggggctggacatgatgatcctatcagtctttcaattggaggccccgttatatcc
aaattcataaatactcttcgagagcttgcctcttataaggagtttctttgctcacaggtg
gagcatgtgttacttgagaggttgatgaactttattaatgttgatctacaggaagctaag
gagtctcgccatcgatttgataaagctgctcattcctatgatcagtctcgtgagaagttt
gtgtctctaaagaagaatacaagaggagaaattgttgcggagttggaagaggatctggag
aactcaaagtcaacatttgagaagagccgttttaacctcgtcaactcactgatgactatt
gaagctaaaaagaagtatgagtttttggaatctataagtgcaattatggatgctcatctc
agatattttaaacttggatatgacttgctgggtcaactggaaccatatatccatcagata
ttaacatatgcacaacagtcaaaagaacagtcgaagattgaacaagatcgactagctaga
cgtattcaagaattcagaacgcagtctgaattagacagccagcaacttgccgctaatgcg
gagatctctggtgtcaatggaaaccgtgttgtaggaactatcccttataaaaataccgaa
acaagtttaacagcagacaaggaagtaattaaacaagggtatttattaaagcgatcatca
agtttgagaactgattggaaaaggaagttttttgtccttgatagtcatggctccatgtac
tattacagaaacaatggcaataaatcaatgggatcacagcatcactatagtggttcttct
gaccataccggcgtctttggtcggttccgtgcaagacacaatcgatcagcttctctcact
gaaggcagcttaggctataaaaccatcgatctccgcacttgtttgataaaattggatgca
gaagacatggatctcaggctatgtttcagaatcatttctcctcaaaaaacttacacactt
caggctgaaaatggagcggataggatggactgggtaaacaaaatcacagcagctataggg
acgcttctgaattctcattttctgcaacagtcgccagttcagtacactggttctgctcct
ccaaaaggtgttgtctccatggatcagagtcaacataatgatgcaagacgagatatgggg
gacgatgtctccacaatactcagaggcattgcagggaataatgtatgtgcagagtgcaat
gctcctgatcccgattgggcatcgttgaatcttggagtcttgttgtgcattcagtgctct
ggtgtacacaggaacctaggggttcatatatccaaggtgagatccctcacactagatgtg
aaagtgtgggagccaacgatcttggacttatttagaaatttgggaaatttgtactgtaac
tcactgtgggaagggctacttcaccttgacgatgactgtgaaaacgaatcaacattgtca
cgtgcttcaatttcaaaaccatctccagacgattcctttactgtgaaggagaaatacatt
ctagcgaagtacctggagaaagcattagttatcaaagacgaaagcaaagccaacccttct
gctgcaagtagaatatgggaagctgttcaaagcagaaacatacgagaaatataccgactg
atcgtaacttcgggggatgtgaatttcatcaacaccaagttcgatgacataactgatgtc
gatgcttatcatcacgctgacgcatcagaggaagcggtaaagaaaagacgagacccaact
gcgtgtcagagaatcaaagactccaacgaaccaggaaactgtcttcaaggatgttccttg
ctccacgtggcttgtcacattggtgactctgttttgcttgaactgttgttgcagtttggt
gctgacccaaacatgagagattaccacggaaggactccgttgcaccattgcatatcttca
gggaaccacaaatttgcaaagattctactccgaagaggcgcacgtccatcgatagaggat
gatggagggctaagcgtgctggaaagagcaatggaaatgggagccataaccgatgaagag
ctctttcttctcttagccgagtgcgcttag
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