Brassica napus (rape): 106358027
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Entry
106358027 CDS
T04128
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
bna
Brassica napus (rape)
Pathway
bna03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106358027
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bna03021
]
106358027
03036 Chromosome and associated proteins [BR:
bna03036
]
106358027
Transcription machinery [BR:
bna03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
106358027
Coactivators
SAGA/TFTC/STAGA complex
106358027
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
106358027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
RST
SPMIP10-like
Motif
Other DBs
NCBI-GeneID:
106358027
NCBI-ProteinID:
XP_013653218
UniProt:
A0A078J6T1
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All DBs
Position
A7:11018306..11023211
Genome browser
AA seq
708 aa
AA seq
DB search
MDPSLLKLLEEDDEDESMHSKEDVDAFQASLIREIEGGNHSWSQQFAAWNNGITQDANTN
KLHILVSTQMKEQQQQSVLGSHDRELKHNLPQNHLQSVRLSENPSHVPQATDLQSRNNSI
SMEQPVGSVNLGPTQLQVGELFRLLRPQVDKDRGKQLNTLFYKFKSNEVTKESFLRQARN
IVGERMILWAVRKLQQQGNNGGKVPGDPNHYREPFTSAEDQSQIQSLTEGISAKKSDTCG
GHDNQLHSTSSGTFSSAATVQGLHNSERPVSVNGPAMVHGGPIFPTQNNISLPLNPALCQ
GSVTKGQTMSNDQTVAHVKQKLTDQSFDQVPKPCPVVRQDVSNVPMEQKNGNPRRSDDDL
VKQSSEMVLSAPTTHANFASPSMKTQLDSSTMVNFSAPAATILPGTIVRTTQGQKKSLEA
QGSSLPPLSKRQKLCETSLAGSGKKFNDVTELSGINLMEEERELLSSLPKNNSRVFKSFR
RVAYEEEGRTILQKAPLQRKLAGIMAKSGIKHIKDDVERCLSLCVEERMRVLLSKIIRTS
KQRTDPEKCRNRICITSDIRKQINEMNQKEKDEQEKKHGGEEELKNDTAKEDKRSEQVKA
NKEQAEKRAKAANDAALASVGGDNVFSKWKLMAEARQKPSSETRRNAKKLSGGQRLGKKN
HGSPKVVRSISVKDVIAVVEKEHQMSRSTLLYRLYDSICSYVPTQDKT
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggatccctcccttttgaagctcctcgaagaagatgacgaggatgaatctatgcactcg
aaggaagacgtcgacgcgttccaggcctctctgattcgagaaatcgaaggaggaaatcat
tcttggagtcagcagttcgcagcatggaataatggtattactcaagatgctaataccaat
aagctccatatccttgtgagcactcagatgaaagagcaacaacaacaatctgttttaggg
agtcatgaccgagaattaaagcacaacctgcctcagaaccatctacaatcagttagactc
tctgagaatccttcccatgttccccaagcaactgacttgcagtctaggaacaactctatt
agtatggaacaacctgttggctctgtaaatcttggtccgacacaactacaagtcggtgaa
ttgtttcgtctactgagaccccaagttgacaaagatagagggaagcagctcaatacactg
ttttataaattcaagagtaacgaagttacaaaggaaagtttcttacgacaagcaaggaat
attgtaggtgaacgaatgatcttatgggcagttaggaaactgcaacaacagggaaataac
gggggcaaagtacctggtgacccaaaccattacagagagccctttacttctgctgaagac
caatcccagatacaatctttaaccgaaggcatcagtgctaaaaagtctgacacctgtgga
ggtcatgataaccaactacattcaacaagttcgggcacctttagcagtgcagctactgtg
caaggattacacaattctgagagaccagtttctgtgaatggtcctgctatggttcatggt
ggccctatattccccacccaaaataacatatccttgcctctaaatccggctctttgtcaa
ggatcagtcaccaagggccagacaatgagcaatgatcagacagtggcccacgtgaagcag
aaattgactgatcaaagctttgatcaggtaccgaagccttgtcctgtggtgcggcaagac
gtgtctaatgttccaatggaacagaagaatggtaacccaaggaggtcagatgatgactta
gtgaagcaatcatctgaaatggttttatcagcacctaccacccatgcaaactttgcctct
ccttcaatgaaaacacagctggactctagcacaatggttaatttctctgccccagctgcg
accattctcccaggaactattgttagaacgacacaaggtcagaaaaaatctctggaggca
caaggttcttcgctaccaccattgagtaagaggcaaaaactgtgtgaaacttctttagct
ggaagtggtaaaaagttcaatgatgttacggaactcagtggcatcaatcttatggaagag
gaaagagaattattatcttctctgcctaaaaataacagtcgtgttttcaaatcatttcga
agagttgcgtatgaggaggaaggaagaacgattttgcagaaagctccactgcagagaaag
ctggctggaattatggcaaaaagtggtataaagcatatcaaggatgatgttgagcggtgc
ttgtctctgtgtgtggaggaaaggatgcgtgtattgttgtctaagataatccggacttca
aagcagcggactgatcccgagaagtgtagaaatcggatttgtatcacatctgatatccgg
aaacaaatcaacgaaatgaatcagaaggaaaaagatgaacaggaaaagaaacatggtgga
gaagaagagcttaagaatgatacagcaaaagaagataaacgttcagagcaagtgaaggca
aataaggagcaagccgaaaagagagctaaggctgcaaatgatgctgcccttgcatccgtt
ggaggagataatgtgttttcaaaatggaaacttatggcagaagcacgtcagaaaccttct
tcagagacaagaagaaacgccaaaaaactttctggtggtcaaagattagggaagaagaac
catggttcaccaaaagtggtccgttcaatctctgtgaaggatgtgattgctgttgtggaa
aaagagcatcagatgtccagatcgacgctactgtatcgcttatacgatagtatctgctcg
tatgttccaacccaagataagacatag
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