Brassica napus (rape): 106358052
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Entry
106358052 CDS
T04128
Name
(RefSeq) indole-3-acetic acid-amido synthetase GH3.17
KO
K14487
auxin responsive GH3 gene family
Organism
bna
Brassica napus (rape)
Pathway
bna04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
106358052
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Motif
Pfam:
GH3
GH3_C
GH3_M
Motif
Other DBs
NCBI-GeneID:
106358052
NCBI-ProteinID:
XP_013653244
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Position
A7:complement(10917797..10920732)
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AA seq
608 aa
AA seq
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MIPSYDPNDTEAGLKLLEDLTSNAEAIQEQVLHEILSQNSGTQYLRAFLDGESDKNQQSF
KNKVPVVNYDDIKPFIQRIADGESSDIVSVQPITELLTSSGTSAGKPKLMPSTAKELDRK
TFFYSMLVPVMNKYVNGLDEGKGMYLLFIKPEIKTPSGLMARPVLTSYYKSQHFRNRPFN
KYNVYTSPDQTILCQDSKQSMYCQLLCGLVQRSHVLRVGAVFASAFLRAVKFLEDHYKEL
CADIRTGTITSWITDSACRDSVLSILDGPNQELADEIESECAEKSWEGILRRLWPKAKYV
EVIVTGSMAQYIPTLEFYSGGLPLVSTMYASSECYFGINLNPLCDPSDVSYTLLPNMAYF
EFLPVDDKSHEEIHFASQSNAEDDDSIKEDLIVDLVNVEVGRYYEIVITTFTGLYRYRVG
DILKVTGFYNKAPQFRFVERRNVVLSIDTDKTSEEDLLNAVTQAKLNHLQQPSSLLLTEY
TSYADTSSIPGHYVLFWELKPRYNNDPPKLDDKTMEKCCSEVEDRLDYVYRRCRNKDKSI
GPLEIRVVSLGTFDLLMDFCVSQGSSVNQYKTPRCVKSGGALEILDSRVIGRFFSQRVPQ
WEPLGLDS
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgatacccagttacgacccaaatgatacagaggctggtctcaagcttctcgaggatcta
acctcaaatgcagaagccattcaagaacaagttctccacgaaattctctctcaaaattct
ggaactcaatatctccgagcatttcttgatggagaatccgacaagaatcaacaaagtttc
aagaacaaagtccctgtggtaaattacgacgatataaagcctttcattcaacgaatcgcc
gatggagaatcctctgatatcgtctccgttcaacccatcacagagctcctcactagctcg
gggacttctgcaggaaagccgaagttgatgccttctacagctaaagaattggacaggaaa
acatttttctacagcatgcttgtgcctgtaatgaacaaatatgtgaatgggctagatgaa
ggaaaagggatgtatcttcttttcataaaacctgagatcaagactccttcaggtctaatg
gcacgtcctgtgttgactagttactacaaaagtcagcatttcaggaacagaccattcaat
aagtacaacgtctacacaagccctgaccagacaattctctgtcaagacagcaaacagagc
atgtactgtcagcttctctgtggtttagtccaacgatctcatgtcttaagagttggagct
gtctttgcctctgcctttcttcgagcggtcaagtttctggaagatcattacaaggagctt
tgcgcagacattagaaccggtactatcaccagctggatcactgactcagcctgcagagac
tcggttttatcgattcttgatggaccaaatcaagaactggctgatgaaattgagtccgag
tgtgctgagaagtcatgggaagggattttaaggaggctatggcctaaggctaagtatgtt
gaggtgattgtgacgggttcgatggctcaatacattccaacactagagttttatagcggt
ggtttacccttggtttcaaccatgtatgcttcctctgagtgttactttggtatcaacctt
aatccgctttgtgatccttcggatgtttcgtatacgcttcttcctaacatggcatacttc
gagttcttgcctgttgatgacaaatctcatgaagagattcactttgcttcgcagtctaac
gccgaagatgatgattctatcaaggaagatcttattgtcgaccttgttaatgtggaagtt
ggtcgatactacgaaattgtcattactacgttcacaggtttatacagatacagagtgggt
gatattctaaaagtgaccggtttctacaacaaagcgcctcaatttcgtttcgtggaacga
agaaacgttgtattaagcatagataccgacaaaacaagcgaggaagatctattaaacgcg
gtgacacaagctaaacttaaccatctccaacaaccttcaagcctcttgctcacggagtac
accagctatgcggacacgtcatcgatcccggggcattacgtgctcttctgggagctaaag
ccacgttacaacaacgacccaccaaagctagacgacaagacaatggagaaatgttgttct
gaggttgaggatcgtttggattacgtgtacaggagatgcaggaacaaagataaatctatt
gggccattggagataagagttgtgagtttggggacttttgatttgctgatggatttttgt
gtctcgcaaggatcttcggtgaatcagtacaagactccaagatgtgttaaatctggagga
gctcttgagattcttgattccagagttattgggaggttcttcagtcagagagttcctcag
tgggaaccacttggtttagattcttag
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