Brassica napus (rape): 106358237
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Entry
106358237 CDS
T04128
Name
(RefSeq) tRNA pseudouridine synthase Pus10-like
KO
K07583
tRNA pseudouridine synthase 10 [EC:
5.4.99.25
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bna03016
]
106358237
Enzymes [BR:
bna01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
106358237
Transfer RNA biogenesis [BR:
bna03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
106358237
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pus10_C
Pus10_N_euk
Motif
Other DBs
NCBI-GeneID:
106358237
NCBI-ProteinID:
XP_013653440
LinkDB
All DBs
Position
A7:13263627..13274259
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AA seq
503 aa
AA seq
DB search
MSDESKPASGDSSGLLNGLLTGGAQKPQRVNEAARSLHPNAVKDLLSLGVCERCILRLIT
VTTFDSDLATVSSSTLRGWLGSGFEEAASPEPSICIVCLGVLQFVFYDAKQTLVKMKSDC
GSDHAAWITDLVKQQGHEFDSFGLEVSLPSTISENERAVLLYLKGKYSNEAWLQSEKVSV
KDALKVLVLDPLRASLGAKSDSSSFHIRLTYSKASDDAQGVSETTHERKKRKTDEENGSS
CISENPFEKVYEPCILSVHCNQMPIFFSGRYFKYSRNVSQSRWIIDDERMGEASVEEIIG
GSILPACLGDSYKFHAAGREDIDVRMLGSGRPFLIEVQNSRKCPSQQSLTEIEEKINNSE
KKLVGVKDLKFIGSECWAMMREGEAEKQKQYAALVWISRPLEEKDCNSISSMIELKILQN
TPIRVLHRRSPLERERTIHWMKVEKIKGNAHYFLLHLCTQAGTYIKEFVHGDLGRTTPSM
GSILGCRAEIIQLDVTDVKMGDS
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgaatcaaaacccgcgtccggcgactcatccggtttgctcaacggcctccta
accggtggagcccaaaaaccacagagagtcaacgaagcagctcgatctcttcatcccaat
gctgtgaaagatctgctatctctcggggtctgcgagagatgtattctccgattaataacc
gtcacgactttcgattccgatttggcgacagtctcgtcatcaactcttcggggctggcta
ggctccggattcgaggaagctgcgtcaccggagccgagcatctgcattgtttgtttaggt
gtattgcagttcgttttctatgatgctaaacaaacgctggtgaaaatgaaatcggattgt
ggtagtgatcacgccgcatggataacggacttggtgaagcagcaaggtcatgagttcgat
tcctttggccttgaagtctctctgccttcaactatctcggagaatgagcgtgcagtcttg
ttataccttaaaggaaagtatagcaacgaagcttggctgcagagtgaaaaagtttctgtg
aaggatgctttgaaagttctagtcttggatccacttagagcatctttgggggctaaatca
gattcaagctcttttcacatccgtttgacatactccaaggcatctgatgacgctcaaggc
gtgtctgaaacaacgcatgagagaaagaagaggaaaacagacgaagagaacggatctagc
tgtatctcggagaatccatttgaaaaggtttatgaaccatgcatcttgtcagttcattgc
aaccagatgcctatctttttcagtggcagatactttaagtactccagaaatgtaagtcaa
tcccgatggattattgatgatgaaagaatgggtgaagcgtcggttgaggagataattggt
ggaagtattcttccagcatgcctcggggattcctacaagttccatgctgctggcagagaa
gatattgatgtacggatgttgggttcaggtagacctttcttaatcgaggttcagaactcc
cgcaaatgtccatctcagcaatcgttgacggaaattgaagaaaaaataaacaactcagag
aaaaaactagttggagttaaagatcttaaattcatcggaagtgagtgttgggcaatgatg
cgtgaaggagaagcagagaaacagaagcaatatgctgcacttgtatggatttctcgtcca
cttgaagagaaagattgcaactcaatttcttccatgatagaattgaaaatcttgcagaat
acaccaataagagtgcttcaccgacgaagtccactggaacgtgaaaggactatacactgg
atgaaagtcgaaaagataaaaggaaacgctcactactttctattgcatctatgcactcag
gctggaacatacatcaaagagtttgttcatggagatcttggtcgtactactcccagcatg
ggatcaattttaggttgcagggcggagataatacaactagatgtgactgatgtgaaaatg
ggcgattcttga
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