Brassica napus (rape): 106358407
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Entry
106358407 CDS
T04128
Name
(RefSeq) probable E3 ubiquitin ligase SUD1 isoform X1
KO
K10661
E3 ubiquitin-protein ligase MARCH6 [EC:
2.3.2.27
]
Organism
bna
Brassica napus (rape)
Pathway
bna04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
106358407
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106358407
Enzymes [BR:
bna01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106358407
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
March proteins
106358407
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MARCHF6_C
RINGv
zf-RING_2
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
106358407
NCBI-ProteinID:
XP_013653688
LinkDB
All DBs
Position
A1:complement(2155177..2159659)
Genome browser
AA seq
1110 aa
AA seq
DB search
MEISSAESESLSISGAAASSEVASESSVSSPSSSSLSASSQASPTAFSAVDPASATATAS
RYVDDDEDEEDVCRICRNPGEADNPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCK
HPFSFSPVYAENAPTRLPFQEFVVGIAMKACHVLQFFLRLSFVLSVWLLTIPFITFWIWR
LAFVRSFGEAQRLFLSHISTTVILTDCLHGFLLSASIVFIFLGATSLRDYFRHLRELGGQ
DEREDEGERNGVRAARRPAGQGNRNLAGEGNVEDAGDQGAGVGQVNRRNPENVLARLDIQ
AARLEAQVEQMFDGLDDADGAEDVPFDELVGMQGPVFHLVENAFTVLASNMIFLGVVIFV
PFTLGRVILYHLSWLFAAARGPALTASMHFIDSALENTTLKSALTSVSNLTNEGQENGLV
GQLSEMVKVNGSELNGVNSTLSVAADLLKGSVTGSSKLSDVTTLTVGYMFIVFLVFLYLG
IIALIRYAKGEPLTVGRFYGIASMVEAVPSLLRQFLAAMRHLMTMIKVAFLLVIELGVFP
LMCGWWLDVCTVRMFGKTMSHRVQFLSISPLASSLVHWVVGIMYMLQISIFVSLLRGVLR
PGVLYFLRDPADPNYNPFRDLIDDPVHKHARRVLLSVAVYGSLIVMLVFLPVKLAIRMAP
SIFPLDISVSDPFTEIPADMLLFQICIPFIIEHFRLRTTIKSLLRCWFTAVGWALGLTDF
LLPRPEDNVGQDNGIGEPGRQNRAQVGGPDRAIAALPAADDPNRNLPRAGNVNAGEEYED
DEEQSDTDRYNFVIRIILLLLYAWVTLLLFNSALIVVPVSLGRALFSAIPVLPITHGIKC
NDLYAFVIGTYAFWTAISGGRYAIEHVKSRRTSVLLNQIWKWCGIVFKSSVLLAIWVFII
PVLIGLLFELLVIVPMRVPVDESPVFLLYQDWALGLIFLKIWTRLVMLDHMLPIMDDSWR
AKFERVREDGFSRLQGLWVLREIVFPIVMKLLTALCVPYVLARGVFPMLGYPLVVNSAVY
RFAWIGCLSVSLFCFCAKRCHVWFRNLHNSIRDDRYLIGRRLHNFGEAALANQNLNQSSE
DAGGDGGVLIGREGDADTGLRLRRAIQQEA
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atggagatttcctctgctgaatccgaatcgctatccatctctggcgcggccgcttcttcc
gaggtcgcatcggaatcgtcggtatcttctccctcgtcctcctccctctccgcttcgagc
caggcctctcccaccgccttctccgccgtggatcccgcgtctgcgacggccacagcttcc
agatacgttgatgatgacgaagacgaggaggacgtttgcaggatctgcagaaacccgggg
gaagcggataatccgcttcggtacccgtgcgcttgcagcgggagcatcaagttcgtgcat
caggattgtctccttcagtggcttaatcatagcaacgctcgtcaatgcgaggtttgtaag
catccgttttcgttctcaccagtgtatgctgagaatgctccaacgaggctccctttccag
gagtttgtagttgggatcgcgatgaaagcttgccacgtgttgcagttctttctccggttg
agtttcgtgctttctgtgtggcttctcaccattccctttattacgttttggatttggcgg
ttggcttttgtgaggagctttggtgaagctcagaggctgttcttaagccacatctccacc
accgtgattctcaccgactgtttgcacgggttcttgctctcggctagcattgtcttcatt
ttcctcggggcgacttcgttgagggattactttaggcatttgcgggagttgggaggacag
gatgagagagaagatgaaggggagaggaacggtgttcgtgctgcgaggagacctgctggg
cagggtaataggaaccttgctggagaggggaatgttgaagatgctggagatcagggtgcg
ggtgttggtcaggtcaatagaaggaatcctgaaaatgttctggcgaggttggatatacaa
gcggctcgtctcgaggctcaggttgaacaaatgtttgatggtttggatgacgctgatggt
gctgaagatgttccgtttgacgagctggttggaatgcagggtccggtgtttcatttggtt
gagaatgcctttactgttctggcaagcaatatgatattccttggggttgtgatctttgtg
cctttcactttaggacgggttatattgtatcatctgtcgtggctttttgctgctgctaga
ggccctgccctgaccgcatcaatgcattttattgactcagcattggaaaatacaactctg
aagagtgcgttgacttctgtctcaaatttgactaacgagggccaagaaaatggactggtt
ggtcagctctcagaaatggtgaaagtcaacggaagtgaactgaacggggtaaacagtact
ctatctgttgctgctgatctcttaaaaggttctgttacaggatcgtccaagctatctgat
gtgacaacgctgactgttgggtacatgtttatagtctttctggttttcctttacctcggg
atcattgcactgattcgttatgccaagggtgagccactgactgttgggagattctatggt
atcgcttcaatggtagaagccgtaccatcactccttagacaattcttggcagcaatgagg
catctgatgactatgattaaagttgcctttctattggtcatcgagcttggagtcttcccg
ctgatgtgtgggtggtggctagatgtttgcacggttaggatgtttggtaaaacaatgtct
cacagagtacagtttctatcaatttctcctctggcaagctcacttgttcattgggttgtt
ggaatcatgtacatgctgcaaataagcatcttcgttagccttcttcgaggggttcttcgc
cctggagtcttgtatttccttcgtgatcccgcagatcctaattataatccattccgagat
ttgattgatgatccagtacacaagcatgctcggagggttttgttatctgttgcagtttac
ggtagtttgattgtcatgctggtatttttaccagtcaagctagctatccggatggctcct
tcaatcttcccgctcgacatatctgtatccgacccattcactgagattccggccgacatg
cttctgtttcaaatatgcataccatttatcatcgagcatttcagacttcggaccacaatc
aagtcccttctacgctgctggttcacagccgtcggttgggcccttggtttgacagacttc
ctcttaccaagaccagaggacaacgttggtcaggacaatggaattggtgaaccaggaagg
cagaacagagcacaggtcggtggacctgacagggccatagctgcgcttccagcagctgat
gaccctaacagaaatcttccccgtgccggtaatgtcaacgccggtgaggaatatgaagat
gatgaagaacaatctgatacagacaggtacaactttgtgatccggataatccttctacta
ctttatgcatgggttactctgcttctcttcaattcggcattgatagtcgttccagtttct
ctcgggcgtgctctgttcagtgccatcccagttctcccaataacgcatggcatcaaatgc
aatgatctgtatgctttcgttattggcacatatgccttttggactgccatatctggggga
aggtatgctatcgagcatgtcaagtcgaggaggacttcagtcttgcttaaccaaatatgg
aaatggtgtgggattgtcttcaagagctcggtactattagcaatatgggtttttatcatt
ccggtactgatcggacttctgtttgagcttttggtgatcgtcccaatgagagtcccagta
gatgaaagtcctgtcttccttctgtatcaagattgggctcttggcctcatctttttgaag
atctggactagactggtaatgttggatcatatgcttccgataatggatgatagctggaga
gcaaagtttgagagagtaagagaagatggattctcgaggcttcaagggttgtgggtactg
agagagattgtattcccgattgtaatgaagcttctaacggcattatgcgttccctacgtt
ctggccagaggagtgttcccgatgctcggctatccactagttgtgaactcggcggtctac
agattcgcttggataggttgtctctcggtgagcctcttttgcttctgcgcaaagagatgc
cacgtctggttcagaaaccttcacaactccatccgtgatgaccgttacctcattggtcgg
aggctccataactttggggaagctgccttggctaaccaaaacctaaaccagagcagtgag
gatgctggaggagatggtggggttttgataggacgtgagggagatgcggatactggacta
aggctcagacgtgcgatccaacaagaagcttag
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integrated database retrieval system
