Brassica napus (rape): 106358409
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Entry
106358409 CDS
T04128
Name
(RefSeq) transcription initiation factor TFIID subunit 4b
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
bna
Brassica napus (rape)
Pathway
bna03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106358409
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bna03021
]
106358409
03036 Chromosome and associated proteins [BR:
bna03036
]
106358409
Transcription machinery [BR:
bna03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
106358409
Coactivators
SAGA/TFTC/STAGA complex
106358409
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
106358409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
RST
SPMIP10-like
OSCP
Motif
Other DBs
NCBI-GeneID:
106358409
NCBI-ProteinID:
XP_013653656
UniProt:
A0A078H014
LinkDB
All DBs
Position
C7:complement(29900620..29905633)
Genome browser
AA seq
814 aa
AA seq
DB search
MQITTRDWIRLYFFSPSQRILFPFVGASMDPSIFKLLEEDEDESMHSGADVDAFQAALNR
DIEGSASLPTNPPGNSQSPNEQFTTWTNGIGDSNMNLHTQHSTQIKEEQQGSGGVDNQHQ
RDLKHLQHNHPQDLHQAGQRWENPSQVTGLQNPTGGNEPERPHNQETESQYSKLQKMTSQ
QPRGVEQPVNPMNRNPKQVPFAALLPSLIAQLDKDRAMQLRALYSRLKKNEIPKEGFTRH
VKEIVGDQMLRMAVSKLQQVGYNQGKMGIQTPTEINNKKSESDPRGVVHLNQLPPSTGSS
VPVQGFTNHPQHNQMQRPPSSFPMYTSSGSFHSFPGPSTNVSGSSLRPHLHDSHMRNVAL
NQAVGSTGLGVPPQSTTNMMTMPKFERPASVNDPSRVQGGATSHFQNSSSLPLNSVPSQG
SSLSHVKQESVEQSFEQNKAASGTSKEDLEKESSRMVFSAPSNIDANTSMNSRGPLGTSQ
AGFNARMPPKKPTVGQKKPLETLGSSPPPPSKKQKVVQSSMDQSIEQLNDVTAVSGVNLR
EEEEQLFSGGKEDSRVSEASRRVVHEEEERLILQKSPLQNKLAKIMAKAGLKQISNDVER
CLSLCVEERMRGLLTHIIRMSKQRVDTEKSRHRTFITSDIRLQINEMNQKVKEEWEKKQA
EAEKLKKPSDSEDGDSGVDGEKEKEDNRSKGLKGNKEDDDKMRTTAANVAARAAVGGDDT
FLKWQLMAEARQKSVSETGKDGNQKTTSGGGRNSKERQDGGRRFSGPGGRRLGKNQGSSL
QPKVVRKISVKDVVAVLEREPQMSKSTLMYRLIQ
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattaccactcgagattggattcgtttatatttcttttctcccagccagcgtatt
ctttttcctttcgttggagcttcaatggatccttcaattttcaagctcctcgaagaagac
gaggatgaatcgatgcattcgggagctgatgtagacgccttccaggccgctcttaatcga
gatattgaaggttccgcttcactgcccactaacccccctggaaacagccagtctcccaat
gaacagttcaccacatggacgaatggtatcggagattctaatatgaatctccatacgcaa
cacagcacccagattaaggaggaacaacaaggatcaggtggtgtagacaatcaacaccaa
cgtgatttaaaacatttgcaacacaaccatcctcaagacctccaccaagcaggtcaacgc
tgggagaatccttcacaggtaactggattacagaatcctactggtggtaatgaaccagaa
agaccgcataatcaagagactgaatctcagtattcaaaactgcaaaagatgactagtcaa
cagcctcgtggagtggaacagcctgttaaccccatgaaccgcaaccctaagcaagtacca
tttgctgctttgcttccttccttaatagcccaactcgataaagacagagcaatgcagctc
cgtgccctatattctagacttaaaaaaaatgaaatcccaaaagagggtttcacacgacat
gttaaggagattgtaggcgatcagatgcttaggatggcagttagtaaactacagcaggtg
ggttataaccagggaaagatgggaattcaaactcctactgaaatcaataataaaaaatct
gagtctgatcctcgtggagtcgtccaccttaaccaacttccgccgtccacaggcagttca
gttcctgtgcagggatttacaaatcatcctcagcataaccagatgcagcgcccaccaagt
tcgtttcctatgtataccagctctggtagttttcactcattcccgggtccaagcaccaat
gtttctggttcctcgttgagaccacaccttcatgattcccatatgagaaatgtggcactt
aaccaggccgtgggatcaactggtcttggagtacctccccagtctaccacaaacatgatg
actatgcccaagtttgagagaccagcttctgtaaatgatcctagtagggttcaaggcggc
gctacttcacacttccagaacagctcatcgttgcctctaaattctgtacctagtcaagga
tcatcactgtcccatgtgaagcaggaatcagttgaacaaagttttgaacagaataaggca
gcctcaggaacttcgaaggaggatttagagaaggagtcctctagaatggttttttccgca
cctagcaatattgacgcgaacacatcaatgaattctcgtggtccgttgggtacgtcacaa
gcaggatttaatgctaggatgccacccaaaaagccaactgtcggtcagaagaaaccactg
gagacattgggttcttcaccgccaccaccaagcaagaagcaaaaagtagtgcaaagttct
atggatcaaagtatcgaacagctcaatgatgtcactgcagtcagtggtgtcaatctcagg
gaagaggaagaacaattattttccgggggcaaggaggatagtcgtgtttctgaagcatct
cgtagagttgtgcacgaagaggaagaaagattaattttgcagaaaagtccactgcagaat
aagctggcaaaaattatggcgaaagctgggctaaagcagataagcaatgatgttgaacgg
tgtttgtctttgtgtgtggaggaaaggatgcgaggactattaactcatataattcggatg
tcaaagcagcgggttgatactgagaaatctagacaccggacctttatcacgtcagatatt
cggctacaaatcaacgaaatgaaccagaaggtgaaagaggaatgggaaaagaaacaggct
gaagcggaaaaacttaagaaaccaagcgacagtgaagatggtgatagtggagtggatggt
gagaaggagaaagaagataaccgttcaaagggtttgaagggaaataaagaggacgacgac
aaaatgagaacgacagcagcaaacgttgctgctcgtgctgctgtgggaggagatgatacg
tttttgaaatggcaattaatggcagaagctcgtcagaagtctgtatctgaaactggaaaa
gatggtaatcagaaaactacttcgggtggaggaagaaactccaaggagagacaagatggt
ggacgtcggttttctggccctggtggtcgaagattagggaagaaccaaggttcatcgctt
caaccaaaagtggtgaggaaaatctcggtgaaggatgtggttgctgtcctcgaaagagag
cctcagatgtctaaatccactctaatgtatcgcttaattcaatag
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