Brassica napus (rape): 106358750
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Entry
106358750 CDS
T04128
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic
KO
K05391
cyclic nucleotide gated channel, plant
Organism
bna
Brassica napus (rape)
Pathway
bna04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
106358750
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bna04040
]
106358750
Ion channels [BR:
bna04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
106358750
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
DUF6525
Motif
Other DBs
NCBI-GeneID:
106358750
NCBI-ProteinID:
XP_013654008
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Position
A1:complement(13573837..13579276)
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AA seq
761 aa
AA seq
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MVSPNKNDKIHMLPISDASSSSSQTRVFTSRTRSVPLSNPTGNSNAATLGYAGSLPSQRP
PLFPVTGPLSSSTRRPEPLFPRPAHPPTRRSSGFFGDLEEVNSSDNDELLKHAHRLRSGK
LGMCNDPYCTTCPSNYNPKASRLPNPTVSASTFHNALYDDARSWARRFASSVNRCLPGIM
NPHSKFVQIWTKFFAVSSLLAIFIDPLFFFIILVQKNNKCIVIDWPIATAFVIVRTLTDV
IFFANMLLQFRLAYVARESTVVGAGQLVDRPKKIALHYFRGYFIVDMIIVMPFPQVLVLS
VIPAQLAISGTNYAKNLLRTGILVQYIPKLYRLLPLLAGQTPTGLIFESAWANFVINLLT
FMLAGHVVGSCWYLFGLQRVNQCLRNACGHSGRECRGLIDCGHGNSNISASLRAIWRNSA
SANACFQEDGFSYGIYLKMVNLTTHTSLLTRYSYSLLWGFQQISTLAGNQVPSYFFPEVV
FTMGIIGLGLLLFALLIGNMQNFLQSLGKRSLEMTLRRRDVEQWMSHRRLPEGIRKRVRE
AERFNWAATRGVNEELLFENMPDDLQGDIRRHLFIFLKKVRIFSLMDESILDSIRERLRQ
RTYISGSTVLHRWGPVEKIVFIVRGEMESIGEDGSVLPLSEGDVCGEELLTWCLERSAVN
LDGRMLSKGLLSSRNVKCVTNVEAFSLSAADLEDVTSLFSRFLRSHRVQGAIRYESPYCR
LRAATQIQVAWRYRKRRLQKFSTAQKKQYSSELIKKDMAKT
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atggtttccccaaacaaaaacgataagattcacatgcttccgatttcagacgcatcgtca
tcttcatctcagactagggttttcacttccaggactcgtagcgttcctctctcaaaccct
actggcaactcgaatgctgcgactttaggctacgcaggttctcttccgagccaacgtcct
cctttattcccagtgactggccctctttcctcttctactcgtagacctgaacctctcttc
cctcgtcctgctcatccccctactcgaagatcttctggcttttttggtgacctggaagag
gtaaactcctcagacaacgatgagttattgaaacacgcacatcgcctgagatctggaaag
ctggggatgtgtaacgatccttactgtaccacttgcccttctaactataaccccaaagca
tcccggcttcccaatccaactgtttctgcttccacgttccataatgccttgtatgatgat
gctagaagttgggctaggcgatttgcttcttctgttaatagatgcttacctggaatcatg
aatcctcattccaaattcgttcaaatatggactaagttctttgccgtctcaagcttgtta
gccatttttatagaccccctcttcttcttcatcatattagtccaaaagaacaacaaatgc
atagtgattgattggccgattgctaccgcatttgttattgttagaactctgacggatgtt
atattctttgctaacatgctgcttcagttccgactggcatatgtagctcgtgagtctacg
gtagttggtgctggccagttggttgatcgtcccaaaaaaattgctctccattactttcga
ggatattttatcgtagacatgatcatagtgatgccatttccacaggtattggtactatcg
gtaataccagcacagttagccatatccgggacaaactatgcgaaaaaccttttacgtact
ggaattcttgtccaatacattccaaagctatatagacttctaccactgcttgctggacaa
acaccaacaggcctcatatttgagtcagcttgggctaactttgttattaatcttctcacc
ttcatgcttgctggacatgttgtcggctcgtgctggtatctttttggtctgcagagagtt
aaccaatgccttcgaaatgcttgtggtcattctgggcgtgaatgtagaggtcttattgat
tgtggccatggaaatagtaatatatcagcatccctacgagctatctggagaaatagtgcg
agtgcaaatgcttgtttccaagaagatgggttttcttacggaatatatttgaaaatggtc
aatcttacaactcatactagtctcttgacaagatatagttactctttgctatggggattt
cagcaaattagcacgcttgctggaaaccaagtcccaagctactttttccctgaggtcgtt
tttactatgggtatcatcggactgggacttttgcttttcgcgcttcttattggtaatatg
caaaacttccttcagtctctcggtaaaaggagcttggaaatgacgctaagacggcgtgat
gtagagcagtggatgagccatagacggttgccagaagggataagaaagagggtgcgagag
gcagagcgtttcaattgggctgctaccagaggagttaacgaagagttgctctttgagaat
atgcctgatgaccttcaaggagatataagaagacacctcttcatatttctcaagaaagta
agaatattttcgttgatggatgaatcaattttagactcaatacgtgagaggctgagacag
aggacatacataagtggtagcacagtcttgcaccgctggggtccggtggagaaaatagtt
ttcatagtgagaggtgagatggagagcattggagaagacggttctgttcttcctctatca
gaaggagacgtttgtggtgaagaacttctcacttggtgccttgaacgctctgctgtaaac
ctcgatgggaggatgctttccaagggattgcttagcagcagaaatgttaagtgtgtgaca
aacgtggaggcgttttcgctgagtgcagcagaccttgaggatgtaacgagcttgttctcg
agattcttaaggagccatcgagtccaaggagccataagatacgagtctccttattgtagg
ctacgagcagctacgcagattcaagtggcttggagatacagaaagagacggctccagaag
ttcagcactgctcaaaagaaacaatattcgtcagagttaatcaaaaaagacatggcgaaa
acatag
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