Brassica napus (rape): 106358826
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Entry
106358826 CDS
T04128
Name
(RefSeq) WD-40 repeat-containing protein MSI2-like
KO
K10752
histone-binding protein RBBP4
Organism
bna
Brassica napus (rape)
Pathway
bna03082
ATP-dependent chromatin remodeling
bna03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106358826
03083 Polycomb repressive complex
106358826
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bna03036
]
106358826
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
106358826
Histone modification proteins
HAT complexes
HATB complex
106358826
HDAC complexes
Sin3A-HDAC complex
106358826
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
106358826
PRC2.2
106358826
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
106358826
Heterochromatin formation proteins
Other heterochromatin formation proteins
106358826
Chromatin remodeling factors
NuRD complex
106358826
NuRF complex
106358826
NuRF complex (fruit fly)
106358826
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
CAF1C_H4-bd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WDR55
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
EIF3I
WD_LRWD1
Beta-prop_EML
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
MIOS_WD40
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_WDR35_TULP_N
eIF2A
WDR90_beta-prop_4th
Beta-prop_NUP159_NUP214
Beta-prop_RIG_1st
Beta-prop_IFT140_1st
Beta-prop_SPT8
Cytochrom_D1
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_Vps41
DUF6922
Motif
Other DBs
NCBI-GeneID:
106358826
NCBI-ProteinID:
XP_048595563
LinkDB
All DBs
Position
A9:complement(6279262..6281370)
Genome browser
AA seq
413 aa
AA seq
DB search
MADEGKEDAGMDQVEEDFSIWKKNTPFLYDLMISNPLEWPSLTVHWVPSPPSPYAADPHF
GVHKLILGTHTSGDAQDFLMVADAVIPTPDAEPGLGGTNHDPIVPKVEIRQKIRVDGEVN
RARCMPQKPTLVGAKTSGCEVFLFDYAKHASKPQSSDCDPDLRLLGHDMEGYGLCWSPFK
EGYLLSGSQDKKICLWDVSATPQDKVLNAMFVYEGHECAVEDVAWHMKNENLFGSAGDDG
RLVIWDTRTNQMQHQVKVHEKEVNYLSFNPFNEWVLATASSDSTVALFDLRKLNVPLHVL
SSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDLNRVGEEQLEIELDAEDGPPELLFSHG
GHKAKISDFAWNKNEPWVIASVAEDNSLQVWQMAESIYRDEDEDEIDEDIKQS
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgaaggtaaggaggatgctggaatggatcaggtagaggaagatttctctata
tggaagaagaacacaccgttcctctacgatctcatgatctccaaccctctcgaatggccc
tccctcaccgtccactgggtcccatctcccccctctccttacgcggcggatcctcacttc
ggcgtccacaagctcatcctcggaacccacacttccggcgatgctcaagatttcctcatg
gtcgccgacgccgtcatcccaactcccgacgccgagccagggttaggcggcacaaatcac
gatcccatagtccctaaggtggagattaggcagaagatacgtgtcgatggagaagtgaac
agagcgcgttgcatgcctcaaaagcctactctcgtcggtgcgaagacgagtgggtgtgag
gtgtttctgtttgattacgccaagcacgcttcgaagcctcagagtagtgattgtgatcct
gatctgaggctactgggacacgacatggaagggtatggattgtgttggagtcctttcaag
gaaggttatcttctgagtggttcgcaggataagaagatctgcctctgggatgtttcagct
acaccgcaagataaggttctgaatgcaatgtttgtgtacgagggacatgaatgcgctgtg
gaagatgtagcgtggcacatgaagaacgagaacctttttggttctgctggtgatgatggt
cgattggtgatatgggacacgcggacaaaccaaatgcaacaccaagtgaaagttcacgag
aaagaggtgaactatttgtctttcaatccgttcaacgaatgggttttagcaacagcttcg
tcagactcaactgttgccttgtttgacctccggaagctgaatgtgccattgcacgtcttg
agcagccacgagggagaggttttccaagtggagtgggatcctaaccatgaaacagtgctt
gcatcttccggtgaagacagaaggctgatggtctgggacctgaacagggttggagaagag
cagcttgagatagagttggatgcagaagatggtccaccagagttgctcttttctcacggt
ggccacaaggctaagatatcagattttgcctggaacaaaaacgagccttgggtcattgca
agtgtagcagaagacaacagtcttcaggtctggcaaatggcggaaagcatctatcgagat
gaagatgaagatgagatcgatgaggacataaaacagtcatga
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