Brassica napus (rape): 106360224
Help
Entry
106360224 CDS
T04128
Name
(RefSeq) probable pectinesterase 56
KO
K01051
pectinesterase [EC:
3.1.1.11
]
Organism
bna
Brassica napus (rape)
Pathway
bna00040
Pentose and glucuronate interconversions
bna01100
Metabolic pathways
Module
bna_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
106360224
Enzymes [BR:
bna01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
106360224
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectinesterase
Motif
Other DBs
NCBI-GeneID:
106360224
NCBI-ProteinID:
XP_013655264
UniProt:
A0A078G8J6
LinkDB
All DBs
Position
A8:21499992..21501698
Genome browser
AA seq
350 aa
AA seq
DB search
MIHGNFLCFSSLMVSILFWFLCSSVTQVRMTDPEALKVRADVVVAKDGTGQFTTVTEAVA
SAPENIKKRYVIYVKKGVYEEIVNIGKRKDNITIVGDGRDLTILTGSLSGNHTSHTATLG
VDGNGFTAQDIGIQNTAGAEKGQAVALRISGDRSVVYRCRVEAFQDTLYAHSGRQFYREC
YITGTVDFICGEAAAVFQQCQIEARKPMKGQSNMITAQSRSYKTQNSGFTIYKCNITATP
DLTPVKGTVKTFLGRPWGPYSTVVVMKSFIDDLIDPAGWAPWDIKDKGRLSTLFYGEFQN
YGPGANTTNRVKWKGYKSIKDPKEAATFTLKNLIGVSWLRFRDVPYEDGL
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgatacatggaaatttcttatgtttctcttctcttatggtttccattctcttctggttt
ctctgctcttccgtcacccaagttcgtatgaccgatcccgaggcgctgaaggttagagct
gacgtcgtagtagcaaaggatgggacgggacagttcacgaccgtgacggaggctgtcgca
tcggctccggaaaacatcaagaaacgatacgtcatatatgtgaagaaaggagtatatgaa
gagattgtcaatatcgggaagaggaaagataatattaccatcgtaggtgatggcagagac
ttaacaattctcaccggcagtctcagcggtaaccataccagccatacggcaactctcggt
gttgacggaaatggatttacggcacaggatatcggcatacagaacacagccggagcggag
aagggacaggccgtagccctccgcataagcggggataggtccgtcgtgtaccggtgccga
gttgaagcatttcaagacactctctatgctcactcgggtagacaattttaccgagaatgc
tatataactggcaccgtagattttatctgcggagaagcagcagcggtcttccaacaatgc
cagattgaagctagaaagccgatgaaaggacagagcaacatgattactgcccaatcacgc
agttacaagacccagaactccgggtttactatctacaaatgtaacatcacggcgactcca
gatctcactccagtcaaaggcacggtaaaaacctttctaggacgtccatggggtccttac
tcaaccgtggtggttatgaagtcttttatagacgacctcattgatccagcgggttgggca
ccgtgggacattaaagataaagggcgtttgtcaacattgttctatggagaatttcaaaac
tacggtccgggggcgaatacaaccaatagagtcaaatggaagggatataaatcaataaag
gatccgaaagaagctgcaacattcacacttaaaaaccttataggagtgtcgtggcttaga
tttagagacgttccgtacgaggacggactctaa
DBGET
integrated database retrieval system