Brassica napus (rape): 106360356
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Entry
106360356 CDS
T04128
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
bna
Brassica napus (rape)
Pathway
bna03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106360356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106360356
03110 Chaperones and folding catalysts [BR:
bna03110
]
106360356
03029 Mitochondrial biogenesis [BR:
bna03029
]
106360356
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bna04147
]
106360356
Enzymes [BR:
bna01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
106360356
Messenger RNA biogenesis [BR:
bna03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
106360356
Chaperones and folding catalysts [BR:
bna03110
]
Heat shock proteins
HSP60 / Chaperonin
106360356
Mitochondrial biogenesis [BR:
bna03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
106360356
Exosome [BR:
bna04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
106360356
Exosomal proteins of other body fluids (saliva and urine)
106360356
Exosomal proteins of breast cancer cells
106360356
Exosomal proteins of colorectal cancer cells
106360356
Exosomal proteins of bladder cancer cells
106360356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
KH_PARP14_2
Motif
Other DBs
NCBI-GeneID:
106360356
NCBI-ProteinID:
XP_013655391
LinkDB
All DBs
Position
C3:complement(73865523..73869257)
Genome browser
AA seq
600 aa
AA seq
DB search
MASTFTATSSIGSMVAPNAHKTDKKLMNKLSSSSFGRRQNVFPKLRRSSPAVVCAAKELH
FNKDGTTIRKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDP
VENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGFIAEGVKVVAAGANPVLITRGIEKTAK
ALVAELKKMSKEVEDSELADVAAVSAGNNAEIGSMIAEAMSRVGRKGVVTLEEGKSAENA
LYVVEGMQFDRGYVSPYFVTDSEKMSVEFDNCKLLLVDKKITNARDLVGVLEDAIRGGYP
ILIIAEDIEQEALATLVVNKLRGTLKIAALKAPGFGERKSQYLDDIAILTGATVIREEVG
LSLDKAGKEVLGHAAKVVLTKETSTIVGDGSTQDAVQKRVTQIKNLIEQAEQDYEKEKLN
ERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLASKV
DAIKAALDNDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSNDNVKFGYNAATG
KYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVPVGNPMDNSGYGY
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaaccttcactgcaacgtcttccattggctccatggttgctccaaatgcccac
aaaacggataagaagcttatgaacaagttgtcttcaagctctttcgggaggaggcagaac
gtgttccccaagctcagaagatccagtcctgcagttgtatgtgcagccaaggagttgcat
ttcaacaaagacgggactaccatcaggaagcttcaagctggtgtcaacaagcttgcagac
ctagttggtgtgacacttggacctaaagggcgaaacgttgttcttgagagcaagtatgga
tcaccaagaattgtcaatgatggtgtgactgttgcaagggaggttgaattggaagaccct
gttgagaacattggtgccaaacttgttaggcaagcagctgccaagaccaatgatctggcc
ggtgatggtaccacaacatctgtggttcttgcacaaggttttattgctgagggtgtcaag
gtggtggctgctggtgcaaaccctgtattgatcactagaggcattgagaagacagcaaag
gctttggtagccgagctcaagaaaatgtctaaggaggttgaagacagtgagcttgcagat
gtggcagccgttagtgccggtaacaatgcagaaattggaagcatgattgctgaagcaatg
agcagagtgggcaggaagggtgtggtgacacttgaggagggtaaaagtgcagagaacgct
ctctacgtggtggaaggaatgcaatttgatcgaggttatgtctccccttactttgtgaca
gacagcgagaaaatgtcagttgagttcgacaattgcaagttgcttcttgttgacaagaaa
attaccaatgcaagggatcttgttggtgttctggaggatgcaattagaggaggataccca
attttaataattgcggaagacattgagcaggaggctttagcgacccttgttgttaacaag
cttagaggcacactgaagattgcagctctcaaagctccaggatttggagagcgcaagagc
caataccttgatgatattgccatcctcactggagcgactgtgattcgtgaggaagttggt
ctttcacttgacaaagctggaaaagaggttcttggacatgcagcaaaggttgtcctcact
aaggagacttcgaccattgtgggtgatgggagcacacaggacgcagtgcaaaagcgtgtt
acacaaattaagaaccttattgagcaagcagagcaagactatgagaaggaaaaactgaat
gagagaattgcaaagctctctggtggagttgctgtgattcaggtcggagcacaaactgag
acagaactcaaagagaagaaactgagagttgaagatgctcttaatgctacaaaggctgct
gttgaggaaggaattgtcgttggtggtggttgtactctgcttcgccttgcttccaaggtg
gatgccattaaagccgcccttgacaatgatgaagaaaaggttggagccgacatcgtgaaa
agagcactgagttaccctctgaaactgattgccaagaatgcaggagtcaatggaagcgta
gttagcgagaaggtgctttctaacgataatgtgaagttcggttacaatgctgcaaccggc
aagtacgaggatctaatggctgcaggaatcatcgatccaactaaggttgtgagatgttgc
ttggaacatgcagcttcggttgcaaagacattcttgatgtctgactgtgtggttgttgag
atcaaggagcctgagccagttcccgtaggcaacccaatggacaactcaggttatggatac
tga
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