Brassica napus (rape): 106360360
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Entry
106360360 CDS
T04128
Name
(RefSeq) E3 ubiquitin-protein ligase SIRP1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106360360
04121 Ubiquitin system [BR:
bna04121
]
106360360
Enzymes [BR:
bna01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106360360
Membrane trafficking [BR:
bna04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
106360360
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106360360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-ANAPC11
zf-RING_UBOX
zf-C3HC4_3
zf-HC5HC2H
Rad50_zn_hook
zf-RING_5
zf-RING_10
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
106360360
NCBI-ProteinID:
XP_048607443
LinkDB
All DBs
Position
C3:complement(73876039..73877705)
Genome browser
AA seq
309 aa
AA seq
DB search
MEEEAAVAYWCHMCSRTVDPLMEAEIKCPFCAGGFVEEMAEEEEEEQEHSPNSNSLWAPI
LMQLVNDPSLRARNQSADEDTQNSEAETENDVDSQLQEILRRRRGRRPVSVMHLLDGDRE
RAGSLIVVSGGSLSEYFIGPGFEALLQRLTDNDPNRYGTPPAQKEAVEALATVKIQEGAL
QCSVCLDDFEIGVEAKEMPCEHKFHGDCLLPWLELHSSCPVCRYELPSDETKTETERTQP
NGDGGGSESSSFASRQGSENSDGSHHPEDEEEEESDDDGDDGVELSIPWLLSSLFSSSQD
SSNPSSGTH
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagaagcggcagttgcatactggtgccacatgtgttctcgaactgtggatcca
ttaatggaagctgagatcaaatgccccttttgtgctggtggattcgttgaagagatggct
gaggaagaggaggaagaacaagaacactctccaaattcaaattctctctgggctcccatc
ttgatgcaactcgtgaatgatccttccctccgcgcaaggaaccagagtgctgatgaagat
actcaaaacagcgaggcagagacagagaacgatgtggattctcagctccaagagattctc
aggaggagaaggggaagacgtcccgtttccgttatgcatttgcttgatggtgacagagag
agagctggaagcttgatcgttgtctctggtggttctttgagcgagtatttcatcggtcct
ggcttcgaagccctgcttcagcgtttaacagataacgatcccaacagatacggaactcct
cctgctcaaaaagaagccgttgaggctttggccactgtcaaaatccaagagggtgctctg
cagtgttcggtttgtttggatgattttgagattggggtggaagcaaaagagatgccttgt
gagcacaagtttcacggtgactgcttgctcccgtggcttgagcttcatagttcgtgtccg
gtttgtaggtacgagttaccttcggatgagactaagacggagactgaaagaacacaacca
aatggtgacggtggtggaagtgagtcttcttcctttgcaagcagacaaggaagtgagaat
agcgatggaagtcaccaccctgaggacgaggaggaagaagagagcgatgatgatggtgat
gatggggttgaactctcaatcccgtggctgcttagcagcttgttctcgtcatcccaagac
agcagcaatccatcgagtggtacgcactga
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integrated database retrieval system
