Brassica napus (rape): 106360542
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Entry
106360542 CDS
T04128
Name
(RefSeq) fanconi-associated nuclease 1 homolog
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
bna
Brassica napus (rape)
Pathway
bna03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
106360542
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bna03400
]
106360542
Enzymes [BR:
bna01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
106360542
DNA repair and recombination proteins [BR:
bna03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
106360542
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VRR_NUC
HIRAN
FAN1_HTH
FAN1_TPR
Motif
Other DBs
NCBI-GeneID:
106360542
NCBI-ProteinID:
XP_013655606
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Position
A8:complement(3322896..3327361)
Genome browser
AA seq
866 aa
AA seq
DB search
MLTGQESLLRLIGKRRRCLPNRHNLLSTPTPNSLNLDVNDSGNLISPTGDNIRSPETPPT
YPGNSDDLSVSRKNKKKRRLTQTTLLQWSGSKQSQHSPLIHPQKQQQQSILEFDDDSSSE
EISKTVALDEANGDEAIQTFIVGRKFSDVQDLEAGEKICLLRHPENIKDPNAIKVLSSDS
GLSEILGYLPKDVSQCLSPLIDQYDLKFEGTINSVPKNSSEAVSVKVVCRKMTSDGWKES
ESAGGDFKLMWEKVLQVVEHQMLFPPKTTRYQLNFNVLVQEVLRSCSHLFTADEKAFLES
FTSLSEDSQRLFIRLYTRKGPWFRLSNISYPEVSDSLQALKDLTVKGFMTSVENANDLNY
QTMKEIIELLNVTELRDILSVNKVFSRGSRKRDLINSLCSYYNDGTRINVGTMILERTGL
CAKISSTSESLIWRVERLFFLNGEQDLSSFVLLDLGIIKYPIYKCIDSEQIFSDRTKLLA
YEEAIEVAQLMDESLDCEDSGTVLKCIMIAETRISSSSSSESALFNCFTAPWVYSKMVLL
GVSFLENQKRYNQAVYLLRRLLSCFSCDGRRGYWTVRLSTDLEHMGRPNESLSVAEQGLL
DPWVRAGSRIALQRRILRLAKPPRRWKTPTFPNLVDNKIPEVTIQGRSLNCEVGMKNRFY
GEDGEQCGVEQLALQYYNGEGGGWQGMHTESSIWLTIFGLLMWDILFSDVPGVFQTRFQT
APLDLETESFYQTRKETIEAQLEKVASGMAEEILIISYETHRGTACRGVAWERFSLEELR
AAVACVGGKCVASLCRYLAQDYRSWCSGMPDLLLWRFKENGYEGEAKLVEVKSEKDRLSE
QQRAWLLLLMDSGFNVEICKVRPACV
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgctcaccggacaagaaagcctgcttcggttgatcgggaaacgccgccgatgtctcccc
aaccgccacaatctcctttcaactcctactccgaactcgttgaatctcgatgtcaacgac
tctggcaatctcatctcaccaaccggagacaatatccgttctccggagactcctccgact
tatcccggcaactctgatgatttgagtgtatcaaggaagaacaagaagaaacggagattg
actcagaccactcttcttcagtggtcagggtcaaaacaatctcaacatagtcctttgatc
catccccagaagcagcagcagcaatcaatactcgaatttgatgatgactcaagtagtgag
gagatttcgaaaactgtggctttagacgaagccaatggtgatgaagctattcagaccttt
atagttggtaggaagtttagtgatgttcaggatttagaagctggggaaaagatctgtctt
ttgagacaccctgagaacatcaaggatcccaacgctataaaggtactttcttctgactct
gggttgtctgagatacttgggtatctacctaaagatgtgtcccagtgcttgtccccactg
atcgaccaatatgatcttaagtttgagggaacaataaattctgttcctaagaattcttca
gaagctgtttcagttaaagttgtttgtcgcaagatgacatctgatggttggaaagaaagt
gaatctgctggtggagattttaagcttatgtgggagaaagttcttcaggttgttgagcat
cagatgttatttccgcctaaaacgacaagataccagttgaacttcaatgtattagtacaa
gaggtcctcagaagttgctctcacctattcacagccgatgaaaaagcattcttggaatcc
ttcacatctctttcagaggatagccagagacttttcatccgtctttacacacgaaaagga
ccttggttcaggctatcaaatatttcataccctgaggtatctgattctcttcaagctctg
aaggatctaactgttaagggattcatgacctcagtggaaaacgcaaatgatctaaactac
caaacaatgaaggagatcatagagttgcttaacgtcactgaacttcgtgatatcttatct
gtaaacaaggtattcagccgcggctcaagaaagagagaccttataaattcactctgttct
tattacaacgatgggacgaggatcaacgtaggaacaatgattctggaaagaacaggacta
tgtgctaagatatccagcacatcagaatctctcatatggcgtgttgagagacttttcttt
ctcaacggagagcaggacctatcctctttcgttctgctggatcttggtattatcaagtac
ccaatttacaaatgcattgactcagagcaaatattttcagaccggactaagcttttagca
tatgaagaggccattgaagtggctcagttgatggatgagtctcttgactgtgaggattct
gggacagtgttgaaatgcatcatgattgctgagacccgcatatctagttcctcttcttca
gaatctgcgctatttaattgctttacagctccatgggtttactcaaagatggttctttta
ggagtttcctttcttgagaaccaaaagagatataaccaagcagtttatctactgagacgt
ctgcttagttgcttcagttgtgacgggagacgaggatactggacagtgaggttatcaaca
gatttggagcacatgggacgaccaaacgagagtctttcagtagcagaacaaggactattg
gatccttgggtgcgtgctggttcaagaatagctttgcagagacgcattcttcgtctggca
aaacctccaaggcgctggaaaactcccaccttcccaaatctcgtcgacaacaagatccct
gaggttaccattcaagggaggtcattgaactgtgaagttggcatgaagaacaggttctat
ggagaagacggagagcaatgtggagttgagcagctcgcattgcagtattacaatggagaa
ggaggaggatggcaggggatgcatacagagagtagcatctggttaaccatttttggtctt
ctcatgtgggacattctgttctctgacgtccctggtgttttccaaactcggttccagact
gctcccttggacttagagactgaatctttctatcaaaccaggaaagaaacaatagaggca
cagctggagaaagttgcaagcggaatggctgaagagatacttatcatatcatatgaaaca
caccgtggaacagcgtgcagaggagtggcgtgggagcggttttcgttagaggaactgaga
gcagcagtggcttgtgttggaggcaagtgtgtagcatcgctttgtcggtatctagctcaa
gattataggagctggtgcagtggaatgcctgatctgcttctgtggcggttcaaggagaat
ggttatgaaggtgaagctaagcttgtggaagtgaagtcagagaaagataggttatcagaa
cagcaacgagcttggcttctgcttctaatggattcaggcttcaatgttgagatttgcaaa
gtaagacctgcttgtgtttaa
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