Brassica napus (rape): 106360571
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Entry
106360571 CDS
T04128
Name
(RefSeq) serine/arginine-rich splicing factor SR34A
KO
K12890
serine/arginine-rich splicing factor 1
Organism
bna
Brassica napus (rape)
Pathway
bna03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106360571
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bna03041
]
106360571
Spliceosome [BR:
bna03041
]
Common components
Common spliceosomal components
SR proteins
106360571
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
RRM_3
Nup35_RRM_2
RAP1
Motif
Other DBs
NCBI-GeneID:
106360571
NCBI-ProteinID:
XP_013655640
LinkDB
All DBs
Position
A1:complement(13610412..13613406)
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AA seq
287 aa
AA seq
DB search
MSDRSSRSIYVGNLPGDIRESEIEDLFYKYGRIVDIELKVPPRPPCYCFIEFEHPRDAKD
AVDGRDGYNFDGCRLRVELSHGGRGQSSGDRRGGYGGGGGYRGGGGGGGGGGGSARFGVS
RHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDRDGAYGVVDYTNYDDMKYAIR
KLDDTEFKNPWARGYIRVKKYESSQSRSPSRSRSRSRSRGRDRSRSRSISRSKSPRKDMS
KSPRRSPARSISKSRSPSPDRKKSPLRSRSRSRSLSKSPAKVQQGSE
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatcgatcttctcggtcaatctatgttggtaacttgcccggcgacattagggag
tctgagattgaagatctcttttacaagtatggccgcattgttgatattgaattgaaagtt
ccacctcgtcctccatgttattgctttattgagtttgagcaccctcgggacgccaaagac
gccgttgatggccgtgatggctataactttgacggctgccgcttgagggttgagctttcc
catggtgggcgaggacagtcttcaggtgaccgtcgtggtggatatggaggtggtggtggc
tatcgtggaggtggtggtggtggtggcggcggtggtggatctgctcggtttggcgtctca
cgacactctgaattccgagttattgtacgtggccttccatcatctgcttcatggcaagat
ttgaaggatcatatgcggaaggctggtgatgtgtgcttcgctgaggtcactcgagaccgt
gatggagcttatggtgttgttgactacaccaactacgatgacatgaagtatgctataagg
aaacttgatgatacagagttcaaaaacccatgggctagaggctatataagggtaaagaaa
tatgaaagctcccagtcaagaagcccaagcagaagcagaagccgtagccgtagccgaggc
cgtgatcgcagccgtagccgcagcatcagcagaagcaagagcccaaggaaggatatgagt
aaatcaccaagacgatcccctgccagatcaatatcaaaatctagatcgccatctcctgac
aggaagaagagcccccttaggtccaggtccaggtccaggtctctctcaaaatctccagca
aaggttcaacaaggcagtgagtga
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