Brassica napus (rape): 106360703
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Entry
106360703 CDS
T04128
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 28-like
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bna03041
]
106360703
03009 Ribosome biogenesis [BR:
bna03009
]
106360703
Enzymes [BR:
bna01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106360703
Spliceosome [BR:
bna03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
106360703
Ribosome biogenesis [BR:
bna03009
]
Eukaryotic type
Pre-60S particles
Helicases
106360703
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ARTD15_N
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
106360703
NCBI-ProteinID:
XP_048624593
LinkDB
All DBs
Position
A1:10746837..10754103
Genome browser
AA seq
776 aa
AA seq
DB search
MSGAFFYDADSDDELEFLNHELNSSGEDKAEERKGQAEAVEDEDEKPRGGKRSTNAHSPW
DFTSYSSSVGEEHARRHTTSIDEKISKAIKHRPLPISTEEEDVSDAQHGKQEEEEYLWED
EDTAELKAEAKPFFSTVDGVSFQADSFMKLNLPRPLIQACKTLGYEKPTPIQAACIPLAM
LGRDLCASAITGSGKTAAFALPTLERLMYRPKRVSATRALILTPTRELAVQIHSMIQKLA
QYTDIKCGLIVGGLSVREQEVVLRSMPDIVVATPGRMIDHLRNSMSVDLDDLSVLILDEA
DRLLQTGFATEIQELVRLSPKRRQTMLFSATMTDEVKELAKLSLNKPLRLSADPSARRPP
GLTEEVVRIRRTREANQEAVLLSLCTRTFKSKVIIFSGTKQAAHRLKILFGLAGLKAAEL
HGNLTQAQRLDSLEHFRKQEVDFLIATDVAARGLDIIGVQTVINYACPREIDSYVHRVGR
TARAGRKGYAVTFVTDNDRSLLKVIAKKVGSKLKSRIIPEQSIVKWSQIIDEMEDQYSAV
IREEREERALRKAEMEFAKAENMIEHRDEIYARPKRTWFMTEKEKKLVAKAEKDSARNPS
GKELISADIAEDLKMKEKRKLEREKNLPRKKRRKLEAAREMLEDNEGEEDGEDQKRGRTR
GMEKKKKQEPDKKGLTLVNLGYRRAKAVKAKQRAIDSGKMERPTPNKKQNLNRSKPRTTL
PRNEEMKDLFKSDMSEKKEGRGGAAAAAKPKGKSKNSFKSKGRLVNLTLNSQILDS
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgtccggggccttcttctacgatgcagacagcgacgacgagctcgagttcctcaaccac
gaactaaacagtagcggggaagacaaagctgaagaacgtaaaggtcaagcagaagctgta
gaagacgaagatgagaagcctagaggaggtaaaagaagcactaacgcacattctccgtgg
gacttcacatcttattcaagctccgtcggggaagaacacgcccgccgtcacacaacctct
atcgatgagaagatctccaaagctatcaagcatcgtccgcttcccatctccacagaggaa
gaagatgtctccgatgcccaacacggcaaacaagaggaggaggagtatctctgggaagac
gaagacacagctgagctcaaagcagaagccaagccgtttttctcaactgtggatggagtt
tcgtttcaagctgattcgttcatgaagctcaatctccctcgtccgttgattcaagcttgt
aaaactcttggatacgagaaacctacacctattcaggcagcgtgtatccctttagcaatg
ctggggcgtgatctttgtgccagtgccatcactggatcagggaagactgctgcattcgct
ttacctactcttgagaggttgatgtaccgtcccaagcgggtatctgctactagagctctt
attctcactccaaccagggagttggctgtccagattcacagtatgattcagaagcttgca
cagtatactgatatcaaatgtggattgattgtgggagggctttctgtgagggagcaagag
gttgttctgaggtcaatgccagatattgttgtggcgactcctggacgtatgatagatcat
ttgcgcaattctatgtctgtggatttggatgatctttcggttttaattctcgatgaagca
gatcgcctcctacagactgggtttgccactgaaatacaagagctggttcgcttatctccc
aagaggaggcaaacaatgctcttctcagcgacaatgactgacgaggttaaagagctggcc
aaactctcattgaacaaaccgttgcgtctctcagcggatccatcagctagaaggcctcca
ggcctgactgaggaggtggtgagaatacgcaggacgcgtgaggcaaatcaggaagccgtt
cttctttcattatgcacaagaacttttaaatcaaaagtcatcatctttagtggaacaaaa
caggctgcacatagactgaaaattttattcggactcgctggcctcaaagcagctgagctt
cacggaaacctaactcaagcacaacgtcttgattctttggaacatttcagaaagcaagag
gttgattttctcattgctactgatgtggctgctcgagggcttgacattattggtgtccaa
acagttataaattatgcatgtcctcgggaaatagacagttatgtacacagagttggtaga
acagctagggctgggaggaaaggttatgcagtaacgtttgtgactgacaatgaccgatca
cttttgaaagtcattgcaaagaaggtgggttcaaagttaaagagcagaatcattccagag
cagtcaatagtcaagtggtctcagataatcgatgaaatggaagatcaatactcggctgtt
attcgagaagagagggaagagagagctctaaggaaagccgaaatggaatttgcaaaggcg
gagaacatgattgagcatagagatgaaatatatgcacggccaaaaaggacttggttcatg
acagagaaggagaagaagctcgtggccaaagctgagaaggattctgcacggaacccttct
ggaaaggaactaattagtgctgatatagcggaggacctcaagatgaaggagaagagaaaa
ctcgaacgcgagaagaatctcccgaggaaaaaacgtagaaagcttgaagctgccagagag
atgctagaggataacgaaggagaagaagatggtgaagaccaaaaacgaggaagaacaaga
gggatggaaaagaagaagaagcaagaaccggataagaaaggactgacactagtgaatctt
ggctacaggcgagcaaaggcggtaaaggcaaaacagagagcaattgattccggtaagatg
gagagaccaactccaaacaagaaacaaaacctaaaccggagtaaaccaagaacaacactg
cctcgaaatgaagagatgaaagatctgttcaagagcgatatgagcgagaagaaagaaggc
agaggcggcgccgcagctgcagcaaaacctaaggggaagtcgaagaactctttcaagagc
aaaggccggttagtaaaccttactcttaatagccaaatcttagattcataa
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