Brassica napus (rape): 106360798
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Entry
106360798 CDS
T04128
Name
(RefSeq) guanine nucleotide exchange factor SPIKE 1
KO
K21852
dedicator of cytokinesis protein 6/7/8
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106360798
Membrane trafficking [BR:
bna04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
106360798
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHR-2_Lobe_A
DOCK-C2
DHR-2_Lobe_C
DHR-2_Lobe_B
Motif
Other DBs
NCBI-GeneID:
106360798
NCBI-ProteinID:
XP_048625879
LinkDB
All DBs
Position
A1:10970858..10982416
Genome browser
AA seq
1824 aa
AA seq
DB search
MENNNLRFRKIPRQPLSLPKLEPLLDGNLEQWPHLNQLVQCYGTEWIKDANKYGHYDTTR
PDTFQTQIFEGPDTDTETEFRLASARSATLDEDVACVSGTPFTDSGSPKHFGLPPLPAYE
PAFDWENERSMIFGQRTPESPAASYSSGLKISVRVLSLAFQSGLVEPFYGSISLYNQERK
EKLSEDFYFHISPTEMQDAKPSSENRGVFYLDAPSASVCLLIQLEKTATEEGGVTTSVYS
RKEPVHLTEREKQKLQVWSRIMPYRESFAWAVVPLFDNSITTNTGESASPSSPLAPSMTA
SSSHDGVFEPMAKITSDGKQGSSGGSSVVVEISNLNKVKENYSEESIQDPKRKVHKPVKG
VLRLEIEKHRNGHGDVEDLSENGSIRNESLDLTDRLGDLTLMKCPSAGSGGPHNSGSKWS
TEDVSKNLTSSSGNVDNCYYAFDFCSTTRNEPFLHLFHCLYVYPVAVTLSRKRNPFIRVE
LRKDDTDVRKQPLEAIYPREPGVSLQKWAHTQVAVGARAASYHDEIKVSLPATWTPSHHL
LFTFFHVDLQTKLEAPRPVVIGYASLPLSTYIHSRSDISLPVMRELVPHYLQETTKERLD
YLEDGKSIFKLRLRLCSSLYPTNERVRDFCLEYDRHTLRTSPPWGSELLQAINSLKHVDS
TALLQFLYPILNMLLHLIGNGGETLQVAAFRAMVDILTRVQQVSFDDADRNRFLVTYVDY
SFDDFGGNHPPVYPGLSTVWGSLARSKAKGYRVGPVYDDVLSMAWFFLELIVKSMALEQA
RLFYHNLPSGEDVPPMQLKESVFRCIMQLFDCLLTEVHERCKKGLSLAKRLNSSLAFFCY
DLLYIIEPCQVYELVSLYMDKFSGVCQSILHECKLTFLQIISDHDLFVEMPGRDPSDRNY
LSSILIQELFLSLDHDELPLRAKGARILVILLCKHEFDARYQKAEDKLYIAQLYFPFVGQ
ILDEMPVFYNLNATEKREVLIGVLQIVRNLDDTSLVKAWQQSIARTRLYFKLMEECLILF
EHKKAADSILGGNNSRGPVNEGAGSPKYSERLSPAINNYLSEASRQEVRLEGTPDNGYLW
QRVNSQLASPSQPYSLREALAQAQSSRIGASAQALRESLHPILRQKLELWEENVSATVSL
QVLEITEKFSSMAASHNIATDYGKLDCITTILTSFFSRNQSLAFWKAFFPIFNRIFDLHG
ATLMARENDRFLKQIAFHLLRLAVYRNDSVRKRAVIGLQILVKSSLYFMQTARLRALLTI
TLSELMSDVQVTHMKTDNTLEESGEARRLQLSLSEMADEAKSVTLLRECGLPDDTLLVIP
EKFTENRWSWAQVKQLSDSLVLALDASLGHALLGSVMAMDRYAAAESFYKLGMAFAPVPD
LHIMWLLHLCDAHQEMQSWAEAAQCAVAVAGVIMQALVARNDGVWSKDHVSALRKICPMV
SGEFTTEASAAEVEGYGASKLTVDSAVKYLQLANKLFSQAELYHFCASILELVIPVYKSR
KAYGQLAKCHTLLTNIYESILDQESNPIPFIDATYYRVGFYGEKFGKLDRKEYVYREPRD
VRLGDIMEKLSHIYESRMDSNHILHIIPDSRQVKAEELQAGACYLQITAVDAVMEDEDLG
SRRERIFSLSTGSVRARVFDRFLFDTPFTKNGKTQGGLEDQWKRRTVLQTEGSFPALVNR
LLVTKSESLEFSPVENAIGMIETRTTALRNELEEPRSSDGDHLPRLQSLQRILQGSVAVQ
VNSGVLSVCTAFLSGEPATRLRSQELQQLIAALLEFMAVCKRAIRVHFRLIGEEDQEFHT
QLVNGFQSLTAELSHYIPAILSEL
NT seq
5475 nt
NT seq
+upstream
nt +downstream
nt
atggagaacaacaacctccgctttcgcaagattcctcggcagcctctctctctccccaag
ctcgaacctttgctcgatgggaacctggaacagtggccgcacttgaaccaattggttcag
tgctacggaacggagtggattaaggatgctaataaatacggacactacgacactactcgc
cctgatactttccaaactcagattttcgaaggtcccgacactgatactgagactgagttc
cgtcttgctagtgctaggagtgctacattggatgaggatgtagcctgcgtttctgggacg
ccctttactgattctggatcccccaagcattttgggctacctccactccctgcttatgaa
ccggcttttgactgggaaaatgaaagatctatgatttttggtcagagaactcctgagtct
cctgcagctagctattccagtggtttaaagatttctgtcagagttttgtctctagctttt
cagtctggcttagttgaaccattttatggctccatttcattgtacaaccaagagaggaag
gagaaactctctgaggatttttatttccacatttcgccaaccgaaatgcaggatgccaaa
ccttcatctgaaaatcgtggagtgttttatctagatgccccatcagcatcagtttgcttg
ctgattcaattagaaaaaacagcaaccgaggagggaggcgttacaacatccgtctattcc
cgtaaagaacctgtgcatttaactgaaagggaaaagcaaaagttgcaggtatggtcccgc
attatgccttaccgagaatcttttgcctgggcagttgttccgctttttgataatagtatc
accacaaacactggcgaatctgcttcccctagcagtcctcttgctcccagtatgactgcg
tcaagttcccatgatggtgtttttgaacccatggcaaagatcacatcagatggaaagcaa
ggttcttcaggtggaagttctgtcgttgttgaaatatctaatttaaacaaagttaaggag
aactactctgaggagtcgattcaggaccctaaacggaaggttcataaacctgttaaagga
gttctaagactggaaattgagaaacataggaatggacatggagacgttgaagatctatct
gagaatgggagtatcagaaatgaatctcttgatctgactgaccgcctcggtgacctgacg
cttatgaagtgtcccagtgctggttccggtggaccccataacagtggttccaagtggagt
acagaggatgtttcaaaaaacctaacgagctcaagtgggaatgttgacaattgttattat
gcttttgatttctgctctacgacaagaaacgagccttttctacatctcttccattgcctt
tatgtgtatcccgtagctgttacactgagtcggaaaaggaatccctttatccgggtagaa
ttgagaaaggatgatacagatgtccgaaaacaaccactggaggcaatatatccaagagag
cctggtgtgtcactccagaagtgggctcacacacaagttgctgttggagctagagctgct
agttaccatgatgaaattaaggtgtctctccctgccacctggacgccatcacatcatctg
ctattcactttctttcatgttgatctccagacgaagcttgaagctccaagaccagtagtt
attggatatgcatcacttccattatctacatatatccactcacggtctgacatttctctt
ccggttatgagagaactggttccccattatcttcaagagaccaccaaggagagattagat
tatttggaagatggcaagagtatttttaagttgcgactgagactttgttcatcgctttat
cccaccaacgaacgtgtcagggatttctgtctagaatatgatagacataccctccgaaca
agccctccctggggttcagaactgttgcaggcaattaacagtttgaagcacgttgactcc
actgccctgcttcagtttctctacccaattcttaacatgctccttcatcttattggcaat
ggtggagaaactcttcaggtcgcagcattcagagccatggtggatattttaactcgggtc
cagcaggtgtcgtttgatgatgctgaccgaaatcgttttctggtcacctatgttgattat
tcttttgatgattttggaggcaatcatccaccggtttatcctggattatcaactgtgtgg
ggaagtttagctagaagcaaggctaaaggttaccgggttggacctgtatatgacgatgtt
ttatcaatggcgtggtttttcctcgagttaattgttaaatcaatggcattggagcaggca
cgtcttttttatcacaatctaccttcaggcgaggatgttccacccatgcagctcaaagaa
agtgtctttcgatgtatcatgcaattgtttgattgtcttttaactgaagttcatgaacgt
tgtaaaaagggtctaagcttggcaaaacgtctgaacagcagtttggcctttttctgctat
gatcttctatacatcattgagccctgccaggtctatgaattggtatcgttgtacatggac
aagttttctggtgtttgtcaatctatcctacacgagtgcaagctgacatttttgcaaatt
atctccgatcatgatctctttgtagaaatgcctggcagagacccatcagacaggaactat
ttatcatccatcttaatacaggagctatttctctccctggaccatgatgagctgcctctg
cgggcaaagggtgcaagaattttagtgatcctcttatgcaagcatgaatttgatgctcgg
taccagaaagccgaagataagctgtatattgcacaactatattttccttttgtggggcag
attttagatgaaatgcctgttttctataacctaaatgctactgaaaagcgtgaggtttta
atcggcgtgttgcaaatcgttcgaaatctggatgacacatcacttgtcaaggcatggcag
cagagcattgctcgtacaagattgtatttcaaactcatggaagaatgcctaatactattt
gagcacaagaaagctgctgatagcatcctcgggggaaacaattctcgcgggcctgttaat
gaaggagctggatcaccaaagtactccgagcgactctctcctgctatcaacaattatctg
tcagaggcatcccgccaagaagtcaggctagagggaacacctgataatgggtatttgtgg
cagagagttaattctcagttggcctcccctagccaaccttattctctaagagaagcttta
gctcaagcacaatcttcgcggattggagcttcagcccaggcgttaagagaatcactacac
cctattttgaggcaaaaactggaactatgggaagagaatgtaagtgccactgttagcctc
caggttctggagatcactgagaaattttcatcaatggcagcctctcataacattgctacg
gactatggcaaattagactgcattactacaatattgacgagtttcttctcccggaaccag
tctttagccttctggaaagccttctttcctattttcaacagaatctttgatcttcacggg
gcaacactgatggcaagggaaaatgatcgcttcttaaaacagatagccttccatcttctc
cggcttgctgtttaccgaaatgacagtgtcaggaaaagagccgttattggtcttcaaata
ctagtcaagagctcgctatattttatgcagactgctaggctgagggctttgctgaccatt
acactgtcagaactcatgtcggatgtccaagtaacacatatgaaaacagataatacattg
gaagagagtggagaggcaaggcggcttcaactgtcattaagcgaaatggctgatgaagct
aagagtgtcactctattgagggagtgtggtcttcctgatgatactctgttggtgattccc
gagaaatttacagaaaaccgctggtcttgggctcaagtgaaacaactttctgacagcctt
gttcttgctctagatgcgagcctggggcacgcccttttgggatctgtgatggctatggat
cgatatgctgcagcagagagcttctacaaacttggaatggcatttgctcctgttccagat
cttcacataatgtggttgctgcacctatgtgatgcccaccaggaaatgcagtcctgggct
gaagctgcacagtgtgctgtggcggttgcaggtgtgattatgcaggccttggtggctaga
aatgacggtgtctggagcaaagatcacgtgtctgccttgcgtaaaatttgccccatggta
agtggcgagtttacgacagaggcatccgcagctgaagtagagggttacggtgcttcaaag
ctaacagttgattctgccgtcaagtatctacagcttgcaaataagcttttctcacaagct
gagctctaccatttctgtgcaagcattttggagcttgttatcccagtttacaagagcagg
aaggcttatgggcagttggctaagtgtcacacgctacttactaacatatacgagtccatt
cttgaccaagaatcaaaccctatccctttcattgacgccacgtattaccgtgtgggattc
tacggggagaagtttgggaagctggacaggaaagaatatgtataccgtgaaccacgagat
gtgcggcttggagatataatggaaaagctgagccatatatacgaatcaaggatggacagc
aatcatatactgcacatcattccagattcgagacaagtgaaggcagaagagttgcaagca
ggagcgtgctacctgcagattactgctgttgatgcagtcatggaagatgaggatcttggg
agcagaagagagaggatattctctctttcaactggaagtgttcgagcacgagtctttgac
cggttcttgtttgatacaccgtttacaaagaacggtaagacgcaaggtggattagaagat
caatggaagagaagaacagtgctgcagacggaaggatcattccctgctcttgtgaataga
ctgttggttaccaaatccgaatcccttgaattctcgccggtggagaacgcaattggaatg
attgaaaccagaacaaccgctcttagaaacgagctagaggagcctcgtagctcggacggg
gatcacttaccacggcttcagagtctacagaggattctccaaggaagtgttgcagtgcag
gtcaacagtggggtcttgagtgtttgcacagccttcttatctggtgagcctgcaacgaga
ttgcgttcgcaagaactgcagcaacttatcgcagcacttcttgaattcatggcggtttgc
aagcgagccataagggttcacttcagattaatcggagaagaagaccaagagttccatact
cagctcgtcaatggatttcaatctctcacggcagagctctcccattacattcctgctatc
ttgtccgaactttag
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integrated database retrieval system
