Brassica napus (rape): 106360827
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Entry
106360827 CDS
T04128
Name
(RefSeq) RGG repeats nuclear RNA binding protein B
KO
K13199
plasminogen activator inhibitor 1 RNA-binding protein
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bna03041
]
106360827
Spliceosome [BR:
bna03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
106360827
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Gene cluster
GFIT
Motif
Pfam:
HABP4_PAI-RBP1
Stm1_N
GEMI5_RBS
DUF4604
Motif
Other DBs
NCBI-GeneID:
106360827
NCBI-ProteinID:
XP_013655952
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Position
A8:11077894..11080206
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AA seq
367 aa
AA seq
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MATLNPFDLLDDDAEDPSQLAAAKPLKVEKAAPAQPAKLPSKPLPPSQAVREGKNGPGGG
RGSRGRSGGFNRNNDAPANENGYGGGYRRSEEGDGGRRGGSVGGYRGRGGRRGGYNNGDS
GDFERPRRNYDRQSGAAHGNEFKRDGAGRGNWGTTEDELPPVTEESTTVVEKDLAVEKEG
EATDANKETPVEAQAEKEPEDTEMTLEEYEKVLEEKRKALQSTKVEERKVDTKVFDSMQQ
LSSKKSNNDEVFIKLGTEKDKRPVEREEKTKKSLSINEFLKPANGESYRGGNRGGRVSRG
PREGADRGGRGPREGADRGGRGPRGADRGGRGPRRDNGGGEQKAAAPKFVAPAPKIEDAA
QFPTLGK
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggcgactttgaaccctttcgatctgttggacgatgacgcagaggatcctagccagctc
gctgcggctaagccattgaaggtagagaaagctgctccagctcagcctgctaagttgcct
tctaagccgcttcctccttctcaagccgtgagggagggaaagaacggtcctggtggagga
cgtggcagccgtggtcggagtggtggattcaacaggaacaatgatgctcctgctaatgag
aacggatatggtggaggctacagacgctctgaagaaggagatggaggtagacgcggtggg
tctgttggtggataccgtggtcgtggtggtcgccgtggaggctacaacaatggagactct
ggtgactttgaacgtccacgtaggaactatgaccgccagagtggagcagctcacgggaat
gagtttaaacgtgatggagctggccgtggcaactggggaaccactgaggatgagcttcct
ccggtgactgaagaatccacaactgttgtggagaaggatttggctgttgagaaggaaggt
gaagcaactgatgctaacaaagagacacctgttgaagctcaagcagagaaagagccagag
gacacggagatgactctggaggagtatgagaaagtcttggaggagaagaggaaagctctg
cagtccaccaaggttgaagagaggaaggttgacaccaaagtgtttgactccatgcaacag
ctctcgagcaaaaagagcaacaacgatgaggtcttcatcaaactgggaacagagaaggac
aagcgcccagttgagagagaagagaagaccaagaagtcgttgagcatcaatgagtttctg
aaacctgccaatggcgagagttacagaggtggtaaccgtggcggaagagtaagccgcgga
ccaagagagggagccgacagaggaggtcgtggaccaagagagggagccgacagaggaggt
cgtggaccaagaggagccgacagaggtggtcggggaccaagaagagacaacggaggagga
gagcagaaggctgctgcaccaaaatttgtggctccggcaccaaagattgaagacgcagca
cagttccctactctgggcaagtaa
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