Brassica napus (rape): 106360862
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Entry
106360862 CDS
T04128
Name
(RefSeq) probable starch synthase 4, chloroplastic/amyloplastic isoform X1
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
bna
Brassica napus (rape)
Pathway
bna00500
Starch and sucrose metabolism
bna01100
Metabolic pathways
bna01110
Biosynthesis of secondary metabolites
Module
bna_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
106360862
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
bna01003
]
106360862
Enzymes [BR:
bna01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
106360862
Glycosyltransferases [BR:
bna01003
]
Polysaccharide
Storage polysaccharide
106360862
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_5
Glyco_trans_1_4
Glycos_transf_1
Glyco_transf_4
Glyco_trans_4_4
COG4_N
NNF2_middle
Motif
Other DBs
NCBI-GeneID:
106360862
NCBI-ProteinID:
XP_048594678
LinkDB
All DBs
Position
A8:11390805..11395783
Genome browser
AA seq
1021 aa
AA seq
DB search
MTTTKLSSCFLTNGLVGISCKREHGGSPRFFYLPSRRLLPASCKIRQQRGFDSNKRQDIK
KGSPEPILPISSSLQSNSDEEDSQPDNGSADTIHSTVETNHVDSSTEKRDEDVQKSEVTR
LKSKLTKKKESDGQDLNVLTVPEVAKALSINKSGGEQFSDGQFGELMTMIRNAEQSDILR
LDQARVSALAELSKILSEKEALQGEINVLEMKLAETDERIKTAAQEKVRVELLEEQLEKL
RQEMVSPPPESDGYVLALSREIETLKIENLSLRNDIDTLKSKLESVENTDERVVVLEKEC
SGLESSVKDLESKLLVSQEDVSKLSSLKTECSDLWTKVESLQMLLDRATKQAEQAVLVLQ
QNQDLKSKVEKIEESLKEANVYKESSEKIQQYNELMQHKVELLEERLEKSDAEIFSYVQL
YQESIKEFQETLMRLKEESNRKEPRDEPVDDMPWDYWSRLLLTVDGWLLEKKIANDDADS
LREMVWKKDRRIHDTYIDVKDKSEREAISAFLKLVSSPTSQGLYVVHIAAEMAPVAKVGG
LGDVVAGLGKALQRRGHLVEIILPKYDCMQYVRVRDLRALDTVVESYFDGKLYKNKIWIG
TVEGLPVHFIEPQHPSKFFWRGQFYGEKDDFKRFSYFSRAALELLLQSGKKPDIIHCHDW
QTAFVAPLYWDLYAPKGLDSARICFTCHNFEYQGTSSASDLGSCGLDVNQLNRPDRMQDH
SSGDRVNPVKGAIIFSNIVTTVSPTYAQEVRTSEGGKGLHSTLNSNSKKFIGILNGIDTD
SWNPATDPFLKAQFNAKDLQGKEENKYALRKQLGLSSAEPRRPLVGCITRLVPQKGVHLI
RHAIYRTLELGGQFVLLGSSPVPHIQREFEGIEQQFKSHDHVRLLLKYDEALSHSIYAAS
DMFIIPSIFEPCGLTQMIAMRYGSIPIARKTGGLNDSVFDIDDDTIPTQFQNGFTFQTAD
EQGLNYALERAFNHYKKDEEKWMRLMEKVMSIDFSWASSATQYEELYTRSVARARASPNR
T
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgacgaagctatcaagctgtttcttaaccaatggattagtaggaatctcctgc
aaaagagagcacggaggctctcctcgatttttctatctcccttctcgtcgattgcttcct
gcttcctgtaagatccgacaacaacgtggtttcgactctaataaaagacaagatatcaag
aaaggctctcctgaaccaatcttacccatcagttcaagtcttcagagcaacagcgatgag
gaggactcacaacctgataacggttcagcagacactattcattccaccgtagaaactaat
catgtggattcaagtactgaaaagagagatgaagatgtacagaaaagtgaagttactcgg
cttaaaagtaaacttacaaagaagaaggagagtgatgggcaagacttgaatgttttgacc
gttcctgaggttgcaaaagctttgtccattaacaaaagtggaggcgagcagttctcagat
ggacagtttggggagctaatgacgatgataagaaacgctgagcaaagtgatattctccgg
ctggaccaagcacgagtcagcgctctcgccgagcttagcaagatcctaagtgaaaaggaa
gcattacaaggagaaatcaatgttctggaaatgaagttagctgagactgacgaaaggatc
aaaaccgctgctcaggagaaagtacgcgtagagcttctagaagaacagctagagaagctt
cgtcaagagatggtttctcctcctccggagagcgatggttacgttctagctctcagcaga
gagatagaaacgttgaagatagagaatctgtctttgagaaacgatatagacacgctcaag
tcgaagcttgagagcgttgagaatacagatgaacgtgtggtcgtgttggaaaaggaatgc
tccggtttggagtcttctgtgaaagatttggagagtaagctgttggtttctcaggaagat
gtttccaagctttcctctctcaaaaccgaatgtagtgatctatggacaaaggtggagagt
ctgcagatgctgttagatagagctacaaaacaagcggagcaagcggttttagtgttgcaa
cagaatcaagatcttaaaagcaaggttgagaagattgaggaatcgcttaaagaagccaat
gtttataaagaatcatcagagaaaatccaacagtacaatgagctgatgcagcataaggtg
gaattactcgaggagaggctagagaagtctgatgcggagatattctcctatgttcagtta
tatcaagaatcgatcaaagagtttcaggaaacactcatgagactgaaggaagagagcaat
agaaaagagccgagagatgaaccggttgatgacatgccttgggattattggagtcgtttg
cttttaactgttgatggatggctgcttgagaagaaaatagcaaacgatgatgcagactcg
ctgagagaaatggtgtggaagaaagatagaagaatccacgatacgtacattgacgtcaaa
gacaagagtgaacgtgaggccatctctgcattcctcaagcttgtatcatctccaacaagt
caaggattgtatgtggttcacattgcagctgagatggcacctgtagctaaggtgggcggt
ttgggggatgttgtggcaggtcttggtaaggcattgcaaagaagaggtcatttggtggag
ataatccttcccaaatatgactgtatgcagtatgttcgcgtccgtgacttaagggctttg
gatactgttgtggaatcatactttgatgggaagctatataaaaacaaaatctggataggc
actgttgaaggtttgcctgtacatttcatcgagcctcaacatccaagcaagttcttctgg
agaggacagttctacggagagaaagatgatttcaaacgcttctcttatttcagccgcgct
gcattggagttgcttcttcagtccggcaagaaaccagacatcatacattgtcatgactgg
caaacagcttttgttgctccgctttattgggatctgtatgctccaaaggggttagactcc
gcaagaatatgctttacatgtcacaactttgagtatcaaggtacctcatctgcttcagat
cttggatcatgcggccttgatgttaaccagttaaacagaccggacagaatgcaagatcac
tcatctggagatagagtcaatcctgttaagggtgctatcattttctcaaacattgttaca
actgtgtcccctacttacgctcaagaagttcgaacatctgagggaggaaagggactccac
tcaacactcaattccaactccaagaagttcattgggatccttaacggcattgacacagat
tcgtggaatccagcgacggaccctttccttaaggctcagttcaacgctaaagatctacaa
gggaaagaagaaaacaaatacgcacttagaaagcagcttggactctcttcagcagagcca
agacggcctttggttggttgcataacaagattagtgccacagaaaggagttcatctaatc
agacatgctatttacagaacgttagagttaggtggacagtttgttcttcttggttctagt
ccagtgcctcatattcagagggaatttgaagggattgagcaacagtttaagagccatgat
catgtccggttgttactcaagtacgatgaagctctgtcgcattcgatctacgcagcatct
gatatgttcatcattccttctattttcgaaccttgtggacttacacagatgatcgctatg
aggtatggctccattccaatcgcgcgtaaaacaggtggcttaaacgacagtgtctttgac
atcgatgatgatacaataccaactcagtttcaaaacgggtttacatttcaaaccgctgat
gaacagggtttgaactacgcgttggagagggcatttaatcactacaagaaggatgaagag
aagtggatgagactgatggagaaagtgatgagcatagacttcagctgggcatcatcggct
acgcaatacgaagagctctacacgagatcagtggccagagctagagcttctcctaaccgc
acgtga
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integrated database retrieval system
