Brassica napus (rape): 106360866
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Entry
106360866 CDS
T04128
Name
(RefSeq) phytochrome E
KO
K12123
phytochrome E
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
106360866
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Gene cluster
GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
HisKA
PAS_4
HATPase_c
PAS_9
PAS_8
Motif
Other DBs
NCBI-GeneID:
106360866
NCBI-ProteinID:
XP_013655990
UniProt:
A0A816XLC7
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Position
A1:complement(4908773..4912537)
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AA seq
1113 aa
AA seq
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MGFESSSSAASNMKQPQQKSNTAQQYSVDAGLFADFDHSVYSGKSFNYSKSMISPPNNVP
DEHITAYLSTIQRGGLVQPFGCLIAVQEPSFRILGLSDNCIDFLGLSLASTSQPNHLTVK
GLIGIDARSLFTPSSGVSLAKAASFTEISLMNPVLVHSRTTTTASHKPFYAILHRIDAGI
VIDLEPAKSSDPALTLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTGYDR
VMVYQFHDDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNATPV
KVVQSDELKRSLCLVNSTLRAPHSCHTQYMANMGSIASLVLAIVTKTKNSSKLWGLVVGH
HCSPRYVPFPLRYACEFLMQAFGLQLQMELQLASQLAEKKAMKTQTLLCDMLLRDTVSAI
VTQSPGIMDLVKCDGAALYYKGRCWLVGVTPSESQVKELVDWLVENHGDESTGLTTDSLV
DAGYPGAVSLGDKVCGVAAAGISLKDYLIWFRSNTASAIKWGGAKHHPKDKDDAGRMHPR
SSFKAFLEVAKSRSLPWEVSEIDAIHSLRVIMRESFTISRPVVLSSGGNNGVVGRDASEL
TSFVCEMVRVIETATAPIFGVDSNGCVNGWNNKTAEMTGLGAGEAMGKSLADEIVQEESR
GALESVLSKALRGEEKKNVMLKLRKFGNKDSSSSDVCVLVNSCTSRDYTEKIVGVCFVGQ
DMTSEKAITDRFIRLQGDYKTIVQSLNPLIPPIFASDENARCSEWNAAMEKLTGWSKHEV
IGRMLPGEVFGDLCKVKCQDALTKFLISLYQGIAGGGNVPESSVVGFFSKEGKYIEASLT
ANKSTNSGGKVIGCFFFLQIINKESSSSSPEVKESAQSLNELAYIRQEIKNPLNGIRFAH
KLLESSEISENQRQFLETSDACEKQIATIIEDTDLKSIEEGKLQMETEEFRLESVLDTII
SQVMIMLRERKSQLRVEVSQEIKTLPLYGDRVKLQLILADLLRNIVNHAPFPDSWVGIKI
SPGHKLAHDNNPYIHLQFRMIHPGKGLPSEMLSDMFETREGWVTPDGLGLKLSRKLLEQM
NGRVSYVREDERCFFQVDLQVKTRLGVETGSSI
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atgggattcgagagctcttcatcagccgcaagcaacatgaaacaaccacaacaaaagtcc
aacacagctcaacaatactccgtcgacgccggcctcttcgccgacttcgaccactcagtc
tactccggcaagtccttcaactactccaagtccatgatctcccctcccaacaacgtcccc
gacgagcacatcaccgcctacctctccaccatccaaagaggcggcctcgtccagcccttc
ggctgcctcatcgccgtccaagagcctagcttcagaatcctcggcctcagcgacaactgc
atcgacttcctcggcctctctctcgcttccacctctcaaccaaaccacctcaccgtcaag
ggtttgatcggaatcgacgccaggtccctcttcactccttcctcaggcgtttccttagcc
aaagctgcttcctttactgaaatctcgttgatgaaccctgttttagttcactccagaacc
accaccaccgcctcccataagcccttttacgctatccttcacaggatagacgccgggatt
gtgattgacttggagcccgccaagtcatccgacccggcgttgaccctcgccggagccgtt
cagtctcagaaattggcagtcagagccatctcgaggctccagtcgcttcctggaggagac
attggtgccttgtgtgacaccgttgtggaagatgttcagaggcttaccggctacgaccgt
gttatggtctaccagtttcacgatgatgatcatggtgaggttgtttcggagatcagaagg
tctgatctcgagccttacttgggtttgcactaccctgcgactgatatcccgcaggctgca
cggttcttgtttaaacagaaccgtgtaagaatgatctgtgattgtaatgccactccggtt
aaggttgtgcagagcgatgagctcaagagatctctttgtttggtgaactctacactaaga
gctcctcatagctgtcatactcagtatatggcgaatatgggttctattgcatctcttgtt
cttgctattgtgactaaaaccaaaaactcgagtaagctctgggggttagtggtgggccac
cactgttctcctagatacgtgccgtttccgttacgttacgcttgcgagtttctgatgcaa
gcgtttggactccagcttcagatggagcttcagttagcgtcccagctagctgagaagaag
gctatgaagacgcagactttgctctgcgatatgcttctccgtgatactgtctctgctatc
gtgactcagtctcctgggattatggaccttgtgaagtgcgatggagctgctttgtactac
aaggggaggtgttggctggtcggtgtgactcccagcgagtcgcaggttaaggaactggtg
gattggctggtggagaatcacggtgatgagtctacaggtttgactactgatagtttggtg
gatgctggttaccctggagctgtctctctcggagataaggtctgcggcgtggctgcggcg
gggatctctttaaaagactacttgatttggttcaggtctaataccgctagtgcaatcaaa
tggggaggagctaagcatcaccccaaggataaggatgacgcggggaggatgcatccgagg
tcgtcttttaaagcgtttcttgaagttgcaaagagcaggagcttgccgtgggaagtttct
gagatcgacgcgattcattccctgagggtgataatgagagagtcgtttactatctcaagg
cctgttgtgttgtcgtctggtggtaataacggtgtggtggggagagatgcgagtgagctt
acttcttttgtctgtgagatggttagagtgattgagaccgcgactgcgcctatctttggt
gttgattctaatggatgtgtcaatggttggaataataaaacagctgagatgacggggttg
ggagctggtgaagctatggggaagtcgcttgccgatgagattgttcaggaggagtcacgt
ggagctcttgagagtgtcttgtctaaagccttacgaggtgaagagaagaagaacgtgatg
cttaaactgagaaagtttggtaacaaggattcatcttcttctgatgtgtgtgttctcgtt
aactcatgcacgagtagagactatacggagaaaatagtcggtgtctgcttcgttggccaa
gacatgactagcgagaaggcaataacagataggttcatcaggctgcaaggagactacaag
accattgtccaaagcttaaaccctttgattccacctatattcgcatctgatgagaacgct
cgttgctcagagtggaacgcagcaatggagaagctcaccgggtggtcgaagcacgaggtg
attgggaggatgctacctggtgaagtctttggagatttgtgtaaagtgaagtgccaagat
gcactcacaaagttcttgatctctctgtaccaaggcattgctggtggtggtaatgtacca
gagagttcggtggttgggttctttagtaaagaagggaagtacatagaagcatccttaacg
gcgaacaagagtacgaatagtggagggaaagtcatagggtgtttcttcttcttgcagata
atcaataaagaatcgagttctagctcaccagaggtgaaagagagcgctcagagtctcaac
gagttggcttacataaggcaagagatcaagaaccctctcaacggtatccggtttgcgcat
aagcttcttgaatcctcagagatttcagagaaccagaggcagtttctggagactagtgat
gcttgtgagaagcagattgcgacaataatcgaagacactgacttgaaaagcattgaggaa
ggcaagttgcaaatggagacagaggagtttcgacttgagagcgtcttggacacaatcatt
agccaagtgatgattatgttgagagagaggaagtcacagctcagagttgaagtctcccag
gagatcaaaacgctgcctctctatggtgacagagtaaagcttcagctcattcttgctgat
cttctgcgcaacattgtgaatcatgccccgtttccagatagttgggtaggaatcaagatc
tcaccaggccacaagcttgcacacgacaataatccctatatccatcttcagttcaggatg
atacatcctggaaagggacttccttcagagatgctaagtgatatgttcgagactagagaa
ggatgggtcacgcctgatgggttaggactaaagctttcacggaaattgctggagcagatg
aatggtcgtgtgagttatgttagagaagacgaacgttgtttctttcaagtggatcttcaa
gttaagacaaggttaggtgttgagactggttcaagcatatag
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