Brassica napus (rape): 106360996
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Entry
106360996 CDS
T04128
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 1 homolog
KO
K10683
BRCA1-associated RING domain protein 1
Organism
bna
Brassica napus (rape)
Pathway
bna03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
106360996
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106360996
04121 Ubiquitin system [BR:
bna04121
]
106360996
03036 Chromosome and associated proteins [BR:
bna03036
]
106360996
03400 DNA repair and recombination proteins [BR:
bna03400
]
106360996
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
106360996
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
106360996
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
106360996
DNA repair and recombination proteins [BR:
bna03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
106360996
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
BRCT_2
zf-HC5HC2H
zf-C3HC4_2
zf-RING_UBOX
zf-RING_2
RTT107_BRCT_5
zf-C3HC4
zf-HC5HC2H_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_5
zf-RING_6
zf-RING_10
PTCB-BRCT
zf-Nse
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
106360996
NCBI-ProteinID:
XP_013656142
UniProt:
A0A817A8Y0
LinkDB
All DBs
Position
A8:complement(12387011..12391476)
Genome browser
AA seq
901 aa
AA seq
DB search
MGDDGATHLEKMGRELKCPICLSLFNSAVSLTCNHVFCNACIVKSMKVDATCPVCKVPFH
RREIRGAPHMDSLVSIYKNMEVASGVPMFVSQTKPSSPSEKQKHVGDGSIEKENGKKRQG
SSKGRTSKKRGSRKTKETDVDSSGPIVMKPSSQTNKRVQLSQNHSSQSLTKSTESAEKLK
DYTDRTVIRLNEHPSHDKEENLAPLFWLRDEVDGESSSQRTESDQLLDVTPVDVPSFSDL
KDSDHDTPSKAVEQRPNPGDMFDSEMFEWTQRPCSPEILPSPVKAKDLGKGEIDLPQRKL
SKDASSNKKRKAGSARKKVVNVRVGVSKEDHMASSAGESIGEKQETGGTSGISIRKDGKL
DENVKAKRATRNKGQTSGVQSGVKKSVEAEGKHGTKRKRSSVKVSAEQPVAVSSELSVRT
ENVGKGDQEPEKQSPAEKPSLKKRRKSQTGDLSGRSEKKTSEKRSKLDSCATPSRVTQSR
GKKILSDELNQAGDRQDSTNKKPSLGGSVHLRRCSGPPTNKFTCAFCQSSDETEASGKMS
HYHKGEPVSADFSGGSNVIHVHKNCAEWAPNVYFNRRTAVNLDVELTRSQRITCSCCGLK
GAALGCYNESCKNSFHVTCAKLIPECRWDDKNFVMLCPLDASSKLPCEEASPKGRKRKRA
PEGPLQAQTNQVSEKSDISELQRKPFHGLPKKMVLCCSGLTDEENSVISEFAELSGVTVS
RKWERRVTHVIASINENGACKRTLKFMMGILEGKWILSIDWIKACMKNGECVSEEPYEIS
IDVHGTRQGPYIGRQRALNKEPKLFNGLKFYMMGDFELAYKGYLQDMIVAAGGTILCRRP
VCNDDNEASTIVVFNTEPSKKKTLTERRSDAEALARSVNARAASSSWVLDSIAGCQALDL
M
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgggagacgacggcgcaactcacctggagaagatgggaagagaactcaagtgccctatc
tgcttgagtctatttaattccgcagtttcgcttacctgcaaccatgtcttttgcaatgca
tgtatagtgaaatccatgaaagtcgatgctacttgtcctgtttgtaaagtccctttccat
cgtagagagattcgaggagctcctcatatggatagcttggtgagcatttacaagaacatg
gaagttgcttctggtgtccccatgtttgttagccagactaaaccatcatcaccatcagaa
aaacaaaagcatgtgggagatggttccattgagaaggaaaatggcaagaaacgtcaggga
tctagtaagggccgaacatccaagaagagagggtctagaaaaaccaaggagacagatgtt
gattcctctgggcctattgttatgaaaccttcatcccaaaccaataaacgggtgcagctg
tcgcagaatcactcttcccaaagtttaacaaaatctacagaatcagctgagaaactcaag
gactacactgatagaactgtgattcgtttgaatgagcacccaagtcatgataaagaagag
aatctagcacctttgttttggttgagagatgaagttgatggggagagctcaagccagcga
acagaaagtgaccagcttttagatgtgacacctgttgatgttccttctttcagtgatttg
aaggactcagatcatgacaccccatccaaagcagtcgagcaaaggccaaatccaggagac
atgtttgacagtgaaatgtttgaatggactcaaaggccttgttctccagagattcttcct
agtcctgtgaaggccaaggacctaggtaaaggtgagattgatcttccccaaaggaaacta
tctaaagatgcatcatcaaataaaaaacgcaaagcaggaagtgcaagaaagaaagttgtt
aatgtacgtgttggggtttccaaggaggaccacatggcatcatctgcaggagaaagtatt
ggtgagaaacaagagactggtggaacttctggcatatctatcaggaaagatggaaagctt
gatgaaaatgtgaaagctaaacgggctacaagaaacaagggacagacttcaggtgttcag
tctggtgttaaaaaatctgtggaggcagagggaaagcacgggacaaagaggaaaagatct
agcgttaaagtgtctgcagagcagccggttgctgtatctagtgagctctcagttagaaca
gagaacgttggtaagggggatcaggaacctgaaaaacaaagtcctgcagagaaaccctct
ctgaaaaagagaagaaaatctcaaacgggtgatctctctgggagaagtgaaaagaagact
tcagaaaagagatcaaaacttgattcctgtgcaaccccaagcagagttacacaatcccgt
ggcaagaaaatccttagtgatgagttgaatcaagcgggtgatagacaagattcaactaac
aaaaagccctcacttggaggtagtgtacatttgcgacgatgttctggaccaccaacaaat
aaattcacttgtgcattctgtcagtcctcagacgaaacagaggcttcaggaaaaatgtct
cactaccacaaaggtgaacctgtctctgcagattttagtggagggtctaacgtcatacat
gttcacaaaaattgtgctgaatgggctccaaatgtatacttcaacagacgtacagcagtc
aaccttgatgtggagctgacaagaagccagagaataacttgcagttgctgtgggcttaaa
ggggcagcacttggttgttacaatgagagttgcaagaatagttttcacgttacgtgtgca
aaactgataccagaatgcagatgggacgataaaaactttgtaatgctatgccctttggat
gcatcctctaagttgccttgtgaagaggctagtccaaaaggaagaaaacgcaagcgtgct
cctgaaggaccattgcaagctcagactaatcaagtatctgaaaaatctgacatcagtgag
ctccaaagaaagccttttcacggattacccaagaaaatggttctatgctgttcaggactt
acagatgaagagaatagtgtgatttcggaatttgctgaactgtctggagttacagtctcg
agaaaatgggagcgaagagttacacacgtcattgcatcgatcaatgaaaatggagcctgc
aaaaggacactcaaattcatgatggggatcttggaggggaaatggattctgagcattgat
tggatcaaggcctgtatgaaaaacggagaatgtgtaagcgaggagccatatgagatttcc
attgatgttcatggaacacgacaaggaccttatattggaagacaaagagctttaaacaag
gaaccaaaactttttaacggactaaagttttacatgatgggagacttcgagcttgcttac
aaagggtatcttcaagatatgattgtggcagcaggaggaacaatcctgtgcaggcggccc
gtttgtaatgacgataatgaagcttccacgatcgttgtatttaatactgagccaagcaag
aagaaaactctgacggaaagaagatccgatgctgaggccttggctagatctgttaatgca
agagctgcaagtagttcatgggtcttggattctattgcaggttgccaagctctagacttg
atgtaa
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